Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 10 studies | 29% ± 11% | |
astrocyte | 8 studies | 30% ± 14% | |
endothelial cell | 5 studies | 22% ± 5% | |
epithelial cell | 4 studies | 40% ± 20% | |
ciliated cell | 4 studies | 27% ± 10% | |
microglial cell | 4 studies | 21% ± 5% | |
oligodendrocyte precursor cell | 4 studies | 26% ± 8% | |
lymphocyte | 3 studies | 23% ± 6% | |
GABAergic neuron | 3 studies | 35% ± 3% | |
glutamatergic neuron | 3 studies | 50% ± 7% | |
goblet cell | 3 studies | 30% ± 18% | |
transit amplifying cell | 3 studies | 22% ± 8% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 5 studies | 39% ± 13% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 828.26 | 1445 / 1445 | 100% | 10.57 | 183 / 183 |
brain | 100% | 974.95 | 2641 / 2642 | 100% | 9.97 | 704 / 705 |
intestine | 100% | 1086.70 | 966 / 966 | 100% | 17.16 | 526 / 527 |
stomach | 100% | 778.44 | 359 / 359 | 100% | 15.02 | 285 / 286 |
lung | 100% | 1048.80 | 578 / 578 | 100% | 9.10 | 1150 / 1155 |
breast | 100% | 855.76 | 459 / 459 | 99% | 8.99 | 1110 / 1118 |
thymus | 100% | 877.17 | 653 / 653 | 99% | 6.87 | 598 / 605 |
ovary | 100% | 856.40 | 180 / 180 | 99% | 8.77 | 424 / 430 |
bladder | 100% | 976.33 | 21 / 21 | 98% | 10.08 | 494 / 504 |
pancreas | 99% | 399.05 | 324 / 328 | 98% | 9.92 | 175 / 178 |
uterus | 100% | 929.22 | 170 / 170 | 97% | 7.44 | 445 / 459 |
prostate | 100% | 895.57 | 245 / 245 | 97% | 4.86 | 486 / 502 |
kidney | 100% | 984.90 | 89 / 89 | 97% | 7.45 | 872 / 901 |
skin | 100% | 735.51 | 1806 / 1809 | 86% | 6.45 | 404 / 472 |
adrenal gland | 100% | 650.66 | 258 / 258 | 80% | 3.34 | 184 / 230 |
liver | 100% | 414.69 | 226 / 226 | 70% | 2.94 | 284 / 406 |
adipose | 100% | 870.80 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 902.72 | 1335 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 1196.91 | 241 / 241 | 0% | 0 | 0 / 0 |
muscle | 99% | 401.21 | 798 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 99% | 1042.92 | 919 / 929 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 6.53 | 44 / 45 |
heart | 97% | 487.46 | 835 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 97% | 5.42 | 28 / 29 |
eye | 0% | 0 | 0 / 0 | 54% | 1.92 | 43 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0060271 | Biological process | cilium assembly |
GO_0001895 | Biological process | retina homeostasis |
GO_0008283 | Biological process | cell population proliferation |
GO_0007099 | Biological process | centriole replication |
GO_0005814 | Cellular component | centriole |
GO_0005813 | Cellular component | centrosome |
GO_0036064 | Cellular component | ciliary basal body |
GO_0000922 | Cellular component | spindle pole |
GO_0005737 | Cellular component | cytoplasm |
GO_0005515 | Molecular function | protein binding |
Gene name | POC1B |
Protein name | POC1 centriolar protein B POC1 centriolar protein homolog B POC1 centriolar protein homolog B (Pix1) (Proteome of centriole protein 1B) (WD repeat-containing protein 51B) |
Synonyms | TUWD12 WDR51B hCG_27606 |
Description | FUNCTION: Plays an important role in centriole assembly and/or stability and ciliogenesis . Involved in early steps of centriole duplication, as well as in the later steps of centriole length control . Acts in concert with POC1A to ensure centriole integrity and proper mitotic spindle formation . Required for primary cilia formation, ciliary length and also cell proliferation . Required for retinal integrity . . |
Accessions | ENST00000313546.8 [Q8TC44-1] ENST00000547496.5 ENST00000393179.8 F8VPF1 ENST00000547274.5 ENST00000549504.1 F8VX21 F8VV91 ENST00000549035.1 [Q8TC44-2] Q8IU52 ENST00000546830.1 ENST00000548715.5 Q8TC44 |