Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| oligodendrocyte | 10 studies | 29% ± 11% | |
| astrocyte | 8 studies | 30% ± 14% | |
| endothelial cell | 5 studies | 22% ± 5% | |
| epithelial cell | 4 studies | 40% ± 20% | |
| ciliated cell | 4 studies | 27% ± 10% | |
| microglial cell | 4 studies | 21% ± 5% | |
| oligodendrocyte precursor cell | 4 studies | 26% ± 8% | |
| lymphocyte | 3 studies | 23% ± 6% | |
| GABAergic neuron | 3 studies | 35% ± 3% | |
| glutamatergic neuron | 3 studies | 50% ± 7% | |
| goblet cell | 3 studies | 30% ± 18% | |
| transit amplifying cell | 3 studies | 22% ± 8% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 5 studies | 39% ± 13% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| esophagus | 100% | 828.26 | 1445 / 1445 | 100% | 10.57 | 183 / 183 |
| brain | 100% | 974.95 | 2641 / 2642 | 100% | 9.97 | 704 / 705 |
| intestine | 100% | 1086.70 | 966 / 966 | 100% | 17.16 | 526 / 527 |
| stomach | 100% | 778.44 | 359 / 359 | 100% | 15.02 | 285 / 286 |
| lung | 100% | 1048.80 | 578 / 578 | 100% | 9.10 | 1150 / 1155 |
| breast | 100% | 855.76 | 459 / 459 | 99% | 8.99 | 1110 / 1118 |
| thymus | 100% | 877.17 | 653 / 653 | 99% | 6.87 | 598 / 605 |
| ovary | 100% | 856.40 | 180 / 180 | 99% | 8.77 | 424 / 430 |
| bladder | 100% | 976.33 | 21 / 21 | 98% | 10.08 | 494 / 504 |
| pancreas | 99% | 399.05 | 324 / 328 | 98% | 9.92 | 175 / 178 |
| uterus | 100% | 929.22 | 170 / 170 | 97% | 7.44 | 445 / 459 |
| prostate | 100% | 895.57 | 245 / 245 | 97% | 4.86 | 486 / 502 |
| kidney | 100% | 984.90 | 89 / 89 | 97% | 7.45 | 872 / 901 |
| skin | 100% | 735.51 | 1806 / 1809 | 86% | 6.45 | 404 / 472 |
| adrenal gland | 100% | 650.66 | 258 / 258 | 80% | 3.34 | 184 / 230 |
| liver | 100% | 414.69 | 226 / 226 | 70% | 2.94 | 284 / 406 |
| adipose | 100% | 870.80 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| blood vessel | 100% | 902.72 | 1335 / 1335 | 0% | 0 | 0 / 0 |
| spleen | 100% | 1196.91 | 241 / 241 | 0% | 0 | 0 / 0 |
| muscle | 99% | 401.21 | 798 / 803 | 0% | 0 | 0 / 0 |
| peripheral blood | 99% | 1042.92 | 919 / 929 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 98% | 6.53 | 44 / 45 |
| heart | 97% | 487.46 | 835 / 861 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 97% | 5.42 | 28 / 29 |
| eye | 0% | 0 | 0 / 0 | 54% | 1.92 | 43 / 80 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
| GO_0060271 | Biological process | cilium assembly |
| GO_0001895 | Biological process | retina homeostasis |
| GO_0008283 | Biological process | cell population proliferation |
| GO_0007099 | Biological process | centriole replication |
| GO_0005814 | Cellular component | centriole |
| GO_0005813 | Cellular component | centrosome |
| GO_0036064 | Cellular component | ciliary basal body |
| GO_0000922 | Cellular component | spindle pole |
| GO_0005737 | Cellular component | cytoplasm |
| GO_0005515 | Molecular function | protein binding |
| Gene name | POC1B |
| Protein name | POC1 centriolar protein B POC1 centriolar protein homolog B POC1 centriolar protein homolog B (Pix1) (Proteome of centriole protein 1B) (WD repeat-containing protein 51B) |
| Synonyms | TUWD12 WDR51B hCG_27606 |
| Description | FUNCTION: Plays an important role in centriole assembly and/or stability and ciliogenesis . Involved in early steps of centriole duplication, as well as in the later steps of centriole length control . Acts in concert with POC1A to ensure centriole integrity and proper mitotic spindle formation . Required for primary cilia formation, ciliary length and also cell proliferation . Required for retinal integrity . . |
| Accessions | ENST00000313546.8 [Q8TC44-1] ENST00000547496.5 ENST00000393179.8 F8VPF1 ENST00000547274.5 ENST00000549504.1 F8VX21 F8VV91 ENST00000549035.1 [Q8TC44-2] Q8IU52 ENST00000546830.1 ENST00000548715.5 Q8TC44 |