PNMA6A report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
retinal ganglion cell	4 studies	68% ± 25%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	99%	1053.50	2617 / 2642	92%	11.67	651 / 705
kidney	99%	373.44	88 / 89	89%	16.64	805 / 901
liver	91%	293.28	205 / 226	85%	17.88	344 / 406
ovary	94%	245.23	170 / 180	76%	4.79	328 / 430
thymus	92%	174.21	603 / 653	67%	4.71	407 / 605
uterus	64%	120.46	109 / 170	43%	5.29	197 / 459
eye	0%	0	0 / 0	100%	103.36	80 / 80
adrenal gland	28%	34.94	73 / 258	68%	6.54	156 / 230
skin	22%	25.68	403 / 1809	71%	10.57	337 / 472
blood vessel	65%	169.73	864 / 1335	0%	0	0 / 0
adipose	51%	67.17	613 / 1204	0%	0	0 / 0
pancreas	2%	2.02	8 / 328	47%	2.25	84 / 178
lung	12%	12.86	72 / 578	36%	2.50	421 / 1155
intestine	39%	45.79	378 / 966	10%	0.56	51 / 527
breast	30%	33.75	139 / 459	15%	0.87	169 / 1118
stomach	22%	25.01	80 / 359	16%	0.92	47 / 286
esophagus	24%	25.88	342 / 1445	14%	0.55	26 / 183
lymph node	0%	0	0 / 0	34%	4.97	10 / 29
heart	34%	36.91	292 / 861	0%	0	0 / 0
tonsil	0%	0	0 / 0	24%	1.34	11 / 45
prostate	7%	6.30	17 / 245	13%	0.59	65 / 502
spleen	17%	15.24	40 / 241	0%	0	0 / 0
bladder	0%	0	0 / 21	11%	0.95	54 / 504
muscle	3%	3.29	21 / 803	0%	0	0 / 0
peripheral blood	1%	0.77	8 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1