Name | Number of supported studies | Average coverage | |
---|---|---|---|
pericyte | 8 studies | 25% ± 8% | |
ciliated cell | 7 studies | 26% ± 7% | |
smooth muscle cell | 7 studies | 35% ± 10% | |
neuron | 6 studies | 36% ± 23% | |
glutamatergic neuron | 5 studies | 34% ± 16% | |
myofibroblast cell | 4 studies | 26% ± 7% | |
fibroblast | 4 studies | 23% ± 5% | |
GABAergic neuron | 4 studies | 31% ± 5% | |
platelet | 4 studies | 19% ± 2% | |
pancreatic A cell | 3 studies | 39% ± 9% | |
retinal ganglion cell | 3 studies | 60% ± 25% | |
epithelial cell | 3 studies | 21% ± 1% | |
amacrine cell | 3 studies | 40% ± 15% | |
retina horizontal cell | 3 studies | 27% ± 15% | |
oligodendrocyte precursor cell | 3 studies | 25% ± 11% | |
interneuron | 3 studies | 30% ± 10% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 8494.66 | 2639 / 2642 | 100% | 301.44 | 705 / 705 |
ovary | 100% | 5711.26 | 180 / 180 | 100% | 93.61 | 429 / 430 |
breast | 99% | 2600.73 | 456 / 459 | 98% | 70.10 | 1101 / 1118 |
thymus | 99% | 2258.69 | 646 / 653 | 99% | 91.47 | 597 / 605 |
kidney | 100% | 2816.92 | 89 / 89 | 97% | 66.26 | 878 / 901 |
prostate | 98% | 3717.97 | 241 / 245 | 97% | 70.71 | 489 / 502 |
uterus | 99% | 4940.29 | 169 / 170 | 95% | 62.38 | 436 / 459 |
adrenal gland | 100% | 3277.16 | 257 / 258 | 95% | 157.37 | 218 / 230 |
lung | 96% | 1938.28 | 557 / 578 | 97% | 50.09 | 1115 / 1155 |
esophagus | 94% | 4379.64 | 1352 / 1445 | 95% | 52.24 | 174 / 183 |
intestine | 97% | 4936.76 | 934 / 966 | 77% | 33.07 | 406 / 527 |
skin | 71% | 1610.11 | 1293 / 1809 | 97% | 78.62 | 458 / 472 |
bladder | 95% | 5081.86 | 20 / 21 | 73% | 35.66 | 368 / 504 |
stomach | 78% | 2637.32 | 279 / 359 | 80% | 42.62 | 228 / 286 |
pancreas | 5% | 71.34 | 17 / 328 | 95% | 85.35 | 169 / 178 |
blood vessel | 100% | 5518.76 | 1335 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 2352.23 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 80.45 | 1 / 1 |
adipose | 100% | 3288.86 | 1203 / 1204 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 96% | 39.71 | 43 / 45 |
eye | 0% | 0 | 0 / 0 | 94% | 55.34 | 75 / 80 |
lymph node | 0% | 0 | 0 / 0 | 83% | 29.89 | 24 / 29 |
heart | 83% | 1494.99 | 711 / 861 | 0% | 0 | 0 / 0 |
liver | 4% | 46.31 | 8 / 226 | 34% | 14.21 | 138 / 406 |
muscle | 36% | 533.97 | 287 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 26% | 469.78 | 239 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0043065 | Biological process | positive regulation of apoptotic process |
GO_0002437 | Biological process | inflammatory response to antigenic stimulus |
GO_0005730 | Cellular component | nucleolus |
GO_0005737 | Cellular component | cytoplasm |
GO_0005515 | Molecular function | protein binding |
Gene name | PNMA1 |
Protein name | PNMA1 protein Paraneoplastic antigen Ma1 (37 kDa neuronal protein) (Neuron- and testis-specific protein 1) |
Synonyms | MA1 |
Description | |
Accessions | Q6IAP2 ENST00000316836.5 Q8ND90 |