Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| pericyte | 19 studies | 28% ± 16% | |
| fibroblast | 12 studies | 28% ± 9% | |
| endothelial cell | 6 studies | 31% ± 7% | |
| retinal bipolar neuron | 5 studies | 56% ± 10% | |
| ON-bipolar cell | 4 studies | 46% ± 15% | |
| smooth muscle cell | 3 studies | 47% ± 8% | |
| retinal cone cell | 3 studies | 21% ± 2% | |
| rod bipolar cell | 3 studies | 73% ± 4% | |
| GABAergic neuron | 3 studies | 27% ± 2% | |
| glutamatergic neuron | 3 studies | 30% ± 9% | |
| macrophage | 3 studies | 19% ± 3% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| eye | 3 studies | 22% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| brain | 98% | 1608.47 | 2583 / 2642 | 96% | 7.22 | 677 / 705 |
| breast | 95% | 2478.38 | 434 / 459 | 97% | 9.74 | 1079 / 1118 |
| esophagus | 100% | 2217.49 | 1438 / 1445 | 90% | 5.37 | 164 / 183 |
| lung | 99% | 1342.70 | 570 / 578 | 83% | 4.51 | 954 / 1155 |
| stomach | 94% | 1095.32 | 338 / 359 | 83% | 5.12 | 238 / 286 |
| thymus | 92% | 1100.35 | 603 / 653 | 84% | 8.05 | 507 / 605 |
| intestine | 98% | 1802.89 | 946 / 966 | 76% | 3.84 | 400 / 527 |
| bladder | 100% | 1076.86 | 21 / 21 | 68% | 3.34 | 345 / 504 |
| prostate | 99% | 1760.90 | 243 / 245 | 67% | 2.57 | 337 / 502 |
| uterus | 100% | 4200.64 | 170 / 170 | 61% | 4.11 | 278 / 459 |
| ovary | 100% | 4779.28 | 180 / 180 | 54% | 2.76 | 233 / 430 |
| kidney | 73% | 785.35 | 65 / 89 | 71% | 10.09 | 636 / 901 |
| pancreas | 34% | 190.13 | 111 / 328 | 95% | 8.09 | 169 / 178 |
| skin | 67% | 856.35 | 1219 / 1809 | 60% | 4.42 | 285 / 472 |
| adrenal gland | 45% | 257.91 | 117 / 258 | 69% | 5.25 | 158 / 230 |
| heart | 99% | 2470.63 | 853 / 861 | 0% | 0 | 0 / 0 |
| adipose | 97% | 1975.20 | 1166 / 1204 | 0% | 0 | 0 / 0 |
| spleen | 95% | 815.74 | 229 / 241 | 0% | 0 | 0 / 0 |
| muscle | 85% | 676.89 | 679 / 803 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 76% | 3.89 | 34 / 45 |
| blood vessel | 66% | 708.92 | 883 / 1335 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 48% | 1.68 | 14 / 29 |
| liver | 1% | 5.34 | 3 / 226 | 34% | 2.19 | 140 / 406 |
| peripheral blood | 30% | 268.36 | 275 / 929 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 28% | 1.48 | 22 / 80 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
| GO_0001525 | Biological process | angiogenesis |
| GO_0021510 | Biological process | spinal cord development |
| GO_0030425 | Cellular component | dendrite |
| GO_0043235 | Cellular component | receptor complex |
| GO_0005576 | Cellular component | extracellular region |
| GO_0043025 | Cellular component | neuronal cell body |
| GO_0005886 | Cellular component | plasma membrane |
| GO_0005737 | Cellular component | cytoplasm |
| GO_0005923 | Cellular component | bicellular tight junction |
| GO_0005515 | Molecular function | protein binding |
| Gene name | PLXDC1 |
| Protein name | Alternative protein PLXDC1 Plexin domain containing 1 (cDNA FLJ58221, highly similar to Plexin domain-containing protein 1) Plexin domain-containing protein 1 (Tumor endothelial marker 3) (Tumor endothelial marker 7) Plexin domain containing 1 |
| Synonyms | TEM3 TEM7 |
| Description | FUNCTION: Plays a critical role in endothelial cell capillary morphogenesis. . |
| Accessions | ENST00000315392.9 [Q8IUK5-1] C9JCL2 ENST00000579190.1 ENST00000578390.5 [Q8IUK5-3] ENST00000441877.5 J3KS04 B4E173 J3QR40 ENST00000444911.6 ENST00000415163.5 L8EA73 ENST00000578808.5 C9JWQ3 Q8IUK5 J3QRR7 ENST00000579279.5 |
