Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| fibroblast | 6 studies | 19% ± 2% | |
| epithelial cell | 3 studies | 20% ± 4% | |
| GABAergic neuron | 3 studies | 22% ± 4% | |
| glutamatergic neuron | 3 studies | 28% ± 5% | |
| connective tissue cell | 3 studies | 25% ± 6% |
Insufficient scRNA-seq data for expression of PJA1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| brain | 100% | 3234.51 | 2638 / 2642 | 100% | 97.76 | 704 / 705 |
| ovary | 100% | 2495.77 | 180 / 180 | 99% | 33.87 | 427 / 430 |
| thymus | 100% | 2297.92 | 653 / 653 | 99% | 69.80 | 598 / 605 |
| breast | 100% | 2058.86 | 458 / 459 | 98% | 41.44 | 1095 / 1118 |
| uterus | 100% | 1988.52 | 170 / 170 | 97% | 50.50 | 446 / 459 |
| skin | 100% | 1599.69 | 1807 / 1809 | 97% | 52.42 | 458 / 472 |
| prostate | 100% | 1492.56 | 245 / 245 | 97% | 32.80 | 486 / 502 |
| lung | 100% | 1572.56 | 576 / 578 | 97% | 35.68 | 1117 / 1155 |
| bladder | 100% | 1658.62 | 21 / 21 | 96% | 38.68 | 485 / 504 |
| pancreas | 95% | 708.63 | 311 / 328 | 99% | 48.23 | 176 / 178 |
| esophagus | 99% | 1329.04 | 1437 / 1445 | 93% | 23.87 | 171 / 183 |
| stomach | 99% | 1089.84 | 357 / 359 | 93% | 25.34 | 267 / 286 |
| adrenal gland | 100% | 1364.87 | 257 / 258 | 93% | 48.35 | 213 / 230 |
| kidney | 100% | 1284.67 | 89 / 89 | 92% | 27.07 | 830 / 901 |
| intestine | 98% | 1368.14 | 949 / 966 | 93% | 27.55 | 489 / 527 |
| liver | 51% | 285.51 | 115 / 226 | 66% | 13.86 | 268 / 406 |
| adipose | 100% | 2283.75 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 100% | 31.01 | 29 / 29 |
| spleen | 100% | 1394.66 | 241 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 41.05 | 45 / 45 |
| blood vessel | 100% | 1775.12 | 1334 / 1335 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 95% | 22.69 | 76 / 80 |
| heart | 91% | 893.58 | 786 / 861 | 0% | 0 | 0 / 0 |
| muscle | 70% | 393.50 | 560 / 803 | 0% | 0 | 0 / 0 |
| peripheral blood | 47% | 345.52 | 432 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
| GO_0030163 | Biological process | protein catabolic process |
| GO_0005737 | Cellular component | cytoplasm |
| GO_0061630 | Molecular function | ubiquitin protein ligase activity |
| GO_0046872 | Molecular function | metal ion binding |
| GO_0005515 | Molecular function | protein binding |
| Gene name | PJA1 |
| Protein name | Praja ring finger ubiquitin ligase 1 PJA1 protein E3 ubiquitin-protein ligase Praja-1 (Praja1) (EC 2.3.2.27) (RING finger protein 70) (RING-type E3 ubiquitin transferase Praja-1) |
| Synonyms | RNF70 |
| Description | FUNCTION: Has E2-dependent E3 ubiquitin-protein ligase activity. Ubiquitinates MAGED1 antigen leading to its subsequent degradation by proteasome (By similarity). May be involved in protein sorting. . |
| Accessions | ENST00000374584.3 [Q8NG27-2] Q8NG27 ENST00000374571.5 [Q8NG27-3] K7EPI8 ENST00000471141.1 ENST00000361478.1 [Q8NG27-1] A4FUA0 K7EPW5 ENST00000590146.1 ENST00000374583.1 [Q8NG27-1] |
