PIPOX report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
hepatocyte	5 studies	27% ± 8%	Explore
epithelial cell of proximal tubule	3 studies	19% ± 3%	Explore
astrocyte	3 studies	25% ± 4%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	100%	799.57	2636 / 2642	99%	33.89	696 / 705
liver	100%	16746.43	226 / 226	95%	201.18	384 / 406
kidney	98%	4738.99	87 / 89	58%	10.02	527 / 901
ovary	48%	62.94	87 / 180	70%	9.35	300 / 430
intestine	81%	348.28	782 / 966	33%	4.56	172 / 527
prostate	89%	209.82	217 / 245	15%	0.67	76 / 502
uterus	81%	189.61	137 / 170	19%	1.85	86 / 459
esophagus	61%	148.39	885 / 1445	18%	1.86	33 / 183
bladder	62%	185.14	13 / 21	16%	2.40	80 / 504
stomach	38%	103.69	135 / 359	40%	5.28	113 / 286
blood vessel	65%	88.06	864 / 1335	0%	0	0 / 0
spleen	62%	97.46	150 / 241	0%	0	0 / 0
lung	32%	32.90	184 / 578	26%	3.05	306 / 1155
adrenal gland	27%	27.97	69 / 258	26%	2.53	59 / 230
skin	39%	49.97	698 / 1809	2%	0.11	11 / 472
peripheral blood	32%	67.22	293 / 929	0%	0	0 / 0
pancreas	7%	7.50	23 / 328	16%	2.47	29 / 178
adipose	21%	25.24	247 / 1204	0%	0	0 / 0
breast	14%	13.74	62 / 459	5%	0.51	53 / 1118
tonsil	0%	0	0 / 0	13%	0.76	6 / 45
muscle	7%	6.84	53 / 803	0%	0	0 / 0
thymus	2%	1.76	12 / 653	1%	0.04	4 / 605
eye	0%	0	0 / 0	1%	0.06	1 / 80
heart	1%	0.89	5 / 861	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1