Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 7 studies | 27% ± 9% | |
endothelial cell | 4 studies | 19% ± 3% | |
epithelial cell | 4 studies | 23% ± 7% | |
GABAergic neuron | 3 studies | 46% ± 4% | |
glutamatergic neuron | 3 studies | 60% ± 5% | |
oligodendrocyte precursor cell | 3 studies | 22% ± 4% | |
astrocyte | 3 studies | 30% ± 17% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 45% ± 11% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 1713.06 | 459 / 459 | 100% | 30.03 | 1117 / 1118 |
ovary | 100% | 1376.87 | 180 / 180 | 100% | 15.77 | 429 / 430 |
brain | 100% | 1412.14 | 2635 / 2642 | 100% | 20.16 | 705 / 705 |
lung | 100% | 1490.30 | 577 / 578 | 100% | 20.41 | 1153 / 1155 |
esophagus | 100% | 1115.91 | 1439 / 1445 | 100% | 20.09 | 183 / 183 |
prostate | 100% | 1149.27 | 244 / 245 | 100% | 28.55 | 500 / 502 |
thymus | 100% | 1683.73 | 653 / 653 | 99% | 24.44 | 600 / 605 |
uterus | 99% | 1516.38 | 169 / 170 | 99% | 21.91 | 456 / 459 |
adrenal gland | 100% | 1540.67 | 258 / 258 | 99% | 25.77 | 227 / 230 |
kidney | 100% | 1538.80 | 89 / 89 | 99% | 25.42 | 889 / 901 |
intestine | 100% | 1358.75 | 966 / 966 | 98% | 17.19 | 518 / 527 |
stomach | 100% | 1087.52 | 359 / 359 | 98% | 18.80 | 281 / 286 |
bladder | 100% | 1379.19 | 21 / 21 | 98% | 16.76 | 494 / 504 |
skin | 99% | 1784.07 | 1796 / 1809 | 97% | 28.30 | 460 / 472 |
pancreas | 98% | 769.41 | 320 / 328 | 99% | 19.52 | 176 / 178 |
liver | 99% | 741.33 | 223 / 226 | 96% | 13.11 | 388 / 406 |
blood vessel | 100% | 2655.85 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 12.17 | 29 / 29 |
spleen | 100% | 1245.55 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 19.00 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 5.35 | 1 / 1 |
adipose | 100% | 1606.05 | 1203 / 1204 | 0% | 0 | 0 / 0 |
muscle | 99% | 780.00 | 793 / 803 | 0% | 0 | 0 / 0 |
heart | 97% | 1394.78 | 838 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 90% | 13.78 | 72 / 80 |
peripheral blood | 79% | 689.99 | 731 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0016255 | Biological process | attachment of GPI anchor to protein |
GO_0006508 | Biological process | proteolysis |
GO_0042765 | Cellular component | GPI-anchor transamidase complex |
GO_0016020 | Cellular component | membrane |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0003756 | Molecular function | protein disulfide isomerase activity |
GO_0034235 | Molecular function | GPI anchor binding |
GO_0005515 | Molecular function | protein binding |
GO_0003923 | Molecular function | GPI-anchor transamidase activity |
Gene name | PIGK |
Protein name | GPI-anchor transamidase (Phosphatidylinositol-glycan biosynthesis class K protein) GPI-anchor transamidase (GPI transamidase) (EC 3.-.-.-) (GPI8 homolog) (hGPI8) (Phosphatidylinositol-glycan biosynthesis class K protein) (PIG-K) Phosphatidylinositol glycan anchor biosynthesis class K |
Synonyms | hCG_22810 GPI8 |
Description | FUNCTION: Component of the GPI transamidase complex, necessary for transfer of GPI to proteins . Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. . |
Accessions | B1AK81 ENST00000359130.1 S4R3M5 ENST00000445065.5 ENST00000370812.8 [Q92643-1] A6NEM5 ENST00000487906.5 Q92643 |