Name | Number of supported studies | Average coverage | |
---|---|---|---|
ciliated cell | 14 studies | 29% ± 9% | |
glutamatergic neuron | 8 studies | 44% ± 26% | |
endothelial cell | 6 studies | 24% ± 9% | |
GABAergic neuron | 6 studies | 46% ± 23% | |
retinal ganglion cell | 5 studies | 25% ± 9% | |
astrocyte | 5 studies | 28% ± 8% | |
interneuron | 4 studies | 48% ± 24% | |
GABAergic interneuron | 3 studies | 19% ± 2% | |
neuron | 3 studies | 25% ± 7% | |
epithelial cell | 3 studies | 23% ± 3% | |
retina horizontal cell | 3 studies | 21% ± 3% | |
retinal cone cell | 3 studies | 21% ± 4% | |
retinal rod cell | 3 studies | 18% ± 2% | |
granule cell | 3 studies | 26% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 715.80 | 459 / 459 | 100% | 9.38 | 1113 / 1118 |
lung | 100% | 1351.32 | 578 / 578 | 99% | 7.98 | 1144 / 1155 |
pancreas | 100% | 685.46 | 327 / 328 | 99% | 8.80 | 176 / 178 |
bladder | 100% | 698.38 | 21 / 21 | 98% | 7.46 | 496 / 504 |
ovary | 100% | 554.22 | 180 / 180 | 98% | 7.27 | 421 / 430 |
kidney | 100% | 916.19 | 89 / 89 | 97% | 7.60 | 878 / 901 |
brain | 99% | 1974.15 | 2607 / 2642 | 99% | 7.95 | 695 / 705 |
thymus | 100% | 829.23 | 653 / 653 | 97% | 5.36 | 588 / 605 |
prostate | 100% | 776.54 | 244 / 245 | 97% | 5.58 | 488 / 502 |
uterus | 99% | 840.06 | 169 / 170 | 96% | 8.61 | 441 / 459 |
intestine | 100% | 780.19 | 966 / 966 | 95% | 5.36 | 503 / 527 |
stomach | 100% | 785.91 | 359 / 359 | 95% | 5.49 | 272 / 286 |
adrenal gland | 100% | 1242.18 | 258 / 258 | 92% | 8.08 | 212 / 230 |
esophagus | 95% | 496.18 | 1369 / 1445 | 94% | 6.08 | 172 / 183 |
skin | 76% | 549.43 | 1379 / 1809 | 97% | 10.98 | 457 / 472 |
liver | 96% | 465.43 | 216 / 226 | 74% | 3.57 | 300 / 406 |
lymph node | 0% | 0 | 0 / 0 | 100% | 9.39 | 29 / 29 |
spleen | 100% | 1476.68 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 3.22 | 1 / 1 |
adipose | 100% | 904.99 | 1203 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 99% | 673.67 | 1327 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 97% | 1900.84 | 905 / 929 | 0% | 0 | 0 / 0 |
heart | 94% | 526.57 | 808 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 93% | 5.96 | 42 / 45 |
muscle | 83% | 468.62 | 666 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 65% | 3.86 | 52 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0033106 | Cellular component | cis-Golgi network membrane |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
Gene name | PHTF1 |
Protein name | Putative homeodomain transcription factor 1 Protein PHTF1 |
Synonyms | PHTF |
Description | |
Accessions | ENST00000446739.1 ENST00000412670.1 ENST00000369604.6 [Q9UMS5-1] Q5TCQ5 Q5TCQ3 ENST00000369600.5 ENST00000369598.5 ENST00000357783.6 [Q9UMS5-2] Q9UMS5 H0Y825 F6T5D1 ENST00000393357.6 [Q9UMS5-1] |