Name | Number of supported studies | Average coverage | |
---|---|---|---|
enterocyte | 9 studies | 79% ± 27% | |
goblet cell | 9 studies | 94% ± 6% | |
enteroendocrine cell | 7 studies | 60% ± 33% | |
epithelial cell | 6 studies | 78% ± 23% | |
intestinal crypt stem cell | 4 studies | 92% ± 9% | |
transit amplifying cell | 4 studies | 95% ± 7% | |
neuroendocrine cell | 4 studies | 66% ± 17% | |
progenitor cell | 4 studies | 83% ± 29% | |
paneth cell | 3 studies | 78% ± 21% | |
brush cell | 3 studies | 46% ± 6% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
intestine | 9 studies | 51% ± 31% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
intestine | 91% | 20414.59 | 881 / 966 | 84% | 579.75 | 445 / 527 |
stomach | 85% | 972.80 | 305 / 359 | 75% | 403.93 | 214 / 286 |
bladder | 57% | 74.38 | 12 / 21 | 31% | 222.91 | 154 / 504 |
pancreas | 41% | 10.41 | 134 / 328 | 22% | 26.04 | 39 / 178 |
prostate | 48% | 28.64 | 118 / 245 | 10% | 6.39 | 51 / 502 |
breast | 50% | 134.27 | 229 / 459 | 7% | 6.25 | 77 / 1118 |
esophagus | 12% | 14.31 | 177 / 1445 | 32% | 88.94 | 58 / 183 |
skin | 25% | 17.50 | 449 / 1809 | 0% | 0 | 0 / 472 |
uterus | 14% | 7.41 | 23 / 170 | 1% | 1.23 | 4 / 459 |
liver | 14% | 2.97 | 31 / 226 | 0% | 0 | 0 / 406 |
thymus | 14% | 3.83 | 89 / 653 | 0% | 0 | 0 / 605 |
lung | 4% | 1.80 | 24 / 578 | 9% | 39.01 | 106 / 1155 |
ovary | 12% | 4.06 | 21 / 180 | 0% | 0.62 | 1 / 430 |
spleen | 12% | 2.98 | 28 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 8% | 1.89 | 102 / 1335 | 0% | 0 | 0 / 0 |
kidney | 7% | 1.24 | 6 / 89 | 0% | 0.05 | 1 / 901 |
adipose | 7% | 4.20 | 80 / 1204 | 0% | 0 | 0 / 0 |
adrenal gland | 7% | 1.75 | 17 / 258 | 0% | 0 | 0 / 230 |
muscle | 5% | 1.04 | 41 / 803 | 0% | 0 | 0 / 0 |
heart | 4% | 0.89 | 31 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 3% | 0.63 | 28 / 929 | 0% | 0 | 0 / 0 |
brain | 3% | 0.85 | 73 / 2642 | 0% | 0 | 0 / 705 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
No associated gene sets found.
Gene name | PHGR1 |
Protein name | Proline, histidine and glycine-rich protein 1 Proline-histidine-glycin-rich protein 1 |
Synonyms | |
Description | |
Accessions | ENST00000448599.2 A0A1L2EC20 C9JFL3 |