Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 4 studies | 38% ± 13% | |
GABAergic neuron | 3 studies | 35% ± 3% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 30% ± 12% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 699.09 | 2640 / 2642 | 100% | 16.06 | 704 / 705 |
prostate | 100% | 595.85 | 244 / 245 | 98% | 5.29 | 492 / 502 |
breast | 100% | 502.16 | 459 / 459 | 97% | 9.01 | 1082 / 1118 |
adrenal gland | 100% | 436.67 | 258 / 258 | 95% | 8.54 | 219 / 230 |
skin | 96% | 337.89 | 1737 / 1809 | 94% | 9.10 | 444 / 472 |
uterus | 100% | 692.30 | 170 / 170 | 89% | 7.74 | 407 / 459 |
lung | 99% | 427.29 | 575 / 578 | 88% | 5.71 | 1021 / 1155 |
ovary | 100% | 491.32 | 180 / 180 | 85% | 5.26 | 367 / 430 |
pancreas | 96% | 188.92 | 314 / 328 | 89% | 4.42 | 159 / 178 |
kidney | 100% | 434.13 | 89 / 89 | 81% | 4.44 | 734 / 901 |
thymus | 100% | 439.36 | 652 / 653 | 81% | 3.80 | 490 / 605 |
bladder | 100% | 532.71 | 21 / 21 | 80% | 5.00 | 404 / 504 |
esophagus | 100% | 534.20 | 1440 / 1445 | 80% | 4.11 | 147 / 183 |
intestine | 100% | 674.94 | 965 / 966 | 67% | 2.82 | 355 / 527 |
liver | 94% | 209.13 | 212 / 226 | 72% | 4.46 | 292 / 406 |
stomach | 100% | 417.36 | 359 / 359 | 64% | 3.05 | 184 / 286 |
adipose | 100% | 455.62 | 1204 / 1204 | 0% | 0 | 0 / 0 |
spleen | 100% | 502.95 | 241 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 506.25 | 1331 / 1335 | 0% | 0 | 0 / 0 |
heart | 98% | 329.22 | 840 / 861 | 0% | 0 | 0 / 0 |
muscle | 89% | 152.28 | 713 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 83% | 4.01 | 24 / 29 |
tonsil | 0% | 0 | 0 / 0 | 78% | 4.73 | 35 / 45 |
eye | 0% | 0 | 0 / 0 | 69% | 3.56 | 55 / 80 |
peripheral blood | 24% | 86.34 | 222 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0016020 | Cellular component | membrane |
GO_0003700 | Molecular function | DNA-binding transcription factor activity |
GO_0042802 | Molecular function | identical protein binding |
GO_0005515 | Molecular function | protein binding |
GO_0043565 | Molecular function | sequence-specific DNA binding |
Gene name | PGBD1 |
Protein name | PiggyBac transposable element-derived protein 1 (Cerebral protein 4) |
Synonyms | hucep-4 |
Description | |
Accessions | ENST00000259883.3 Q96JS3 ENST00000682144.1 |