Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 4 studies | 30% ± 11% |
Insufficient scRNA-seq data for expression of PGAP6 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 3545.14 | 1445 / 1445 | 100% | 61.54 | 183 / 183 |
pancreas | 100% | 8017.84 | 328 / 328 | 100% | 73.32 | 178 / 178 |
thymus | 100% | 4628.52 | 653 / 653 | 100% | 68.44 | 603 / 605 |
stomach | 100% | 6043.65 | 359 / 359 | 100% | 90.30 | 285 / 286 |
intestine | 100% | 4825.06 | 966 / 966 | 99% | 97.60 | 524 / 527 |
prostate | 100% | 4764.89 | 245 / 245 | 99% | 108.18 | 499 / 502 |
kidney | 100% | 7248.42 | 89 / 89 | 99% | 63.94 | 893 / 901 |
liver | 100% | 3952.83 | 226 / 226 | 99% | 50.58 | 402 / 406 |
lung | 100% | 5406.60 | 578 / 578 | 99% | 73.61 | 1143 / 1155 |
breast | 100% | 2967.10 | 459 / 459 | 98% | 55.84 | 1095 / 1118 |
bladder | 100% | 3462.33 | 21 / 21 | 98% | 71.64 | 493 / 504 |
brain | 98% | 2151.02 | 2587 / 2642 | 99% | 37.33 | 700 / 705 |
ovary | 97% | 1683.83 | 175 / 180 | 100% | 66.65 | 429 / 430 |
uterus | 100% | 2599.59 | 170 / 170 | 97% | 56.59 | 445 / 459 |
adrenal gland | 100% | 3593.94 | 258 / 258 | 93% | 44.95 | 215 / 230 |
skin | 93% | 2207.53 | 1682 / 1809 | 99% | 120.62 | 469 / 472 |
eye | 0% | 0 | 0 / 0 | 100% | 56.74 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 45.46 | 29 / 29 |
spleen | 100% | 5121.79 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 37.66 | 1 / 1 |
adipose | 100% | 3129.15 | 1203 / 1204 | 0% | 0 | 0 / 0 |
peripheral blood | 100% | 8234.74 | 927 / 929 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 3400.30 | 1331 / 1335 | 0% | 0 | 0 / 0 |
muscle | 99% | 2756.44 | 797 / 803 | 0% | 0 | 0 / 0 |
heart | 99% | 2753.10 | 852 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 37.20 | 44 / 45 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006629 | Biological process | lipid metabolic process |
GO_0008150 | Biological process | biological_process |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005886 | Cellular component | plasma membrane |
GO_0005765 | Cellular component | lysosomal membrane |
GO_0004623 | Molecular function | phospholipase A2 activity |
GO_0005515 | Molecular function | protein binding |
GO_0003674 | Molecular function | molecular_function |
Gene name | PGAP6 |
Protein name | Post-GPI attachment to proteins 6 (Transmembrane protein 8 (Five membrane-spanning domains), isoform CRA_a) Post-GPI attachment to proteins factor 6 (EC 3.1.1.4) (GPI processing phospholipase A2) (GPI-PLA2) (Protein M83) (Transmembrane protein 6) (Transmembrane protein 8) (Transmembrane protein 8A) Post-GPI attachment to proteins 6 |
Synonyms | TMEM6 TMEM8 TMEM8A hCG_1984172 |
Description | FUNCTION: Involved in the lipid remodeling steps of GPI-anchor maturation. Lipid remodeling steps consist in the generation of 2 saturated fatty chains at the sn-2 position of GPI-anchor proteins (GPI-AP). Has phospholipase A2 activity that removes an acyl-chain at the sn-2 position of GPI-anchors during the remodeling of GPI. Required for the shedding of the GPI-AP CRIPTO, but not CFC1, at the cell surface. Shedding of CRIPTO modulates Nodal signaling by allowing soluble CRIPTO to act as a Nodal coreceptor on other cells . Also indirectly involved in the translocation of RAC1 from the cytosol to the plasma membrane by maintaining the steady state amount of CAV1-enriched plasma membrane subdomains, stabilizing RAC1 at the plasma membrane . In contrast to myomaker (TMEM8C), has no fusogenic activity . . |
Accessions | ENST00000250930.7 H0Y5B2 H7C1S0 ENST00000427313.5 ENST00000424078.5 ENST00000448854.1 C9J8D7 K4DI83 Q9HCN3 ENST00000431232.7 |