Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 5 studies | 38% ± 14% | |
ciliated cell | 4 studies | 22% ± 4% | |
epithelial cell | 4 studies | 21% ± 4% | |
endothelial cell | 3 studies | 19% ± 2% | |
GABAergic neuron | 3 studies | 34% ± 7% | |
astrocyte | 3 studies | 21% ± 3% | |
interneuron | 3 studies | 40% ± 10% | |
oligodendrocyte precursor cell | 3 studies | 31% ± 15% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 5 studies | 34% ± 11% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 4189.24 | 245 / 245 | 100% | 80.31 | 502 / 502 |
brain | 100% | 2823.77 | 2637 / 2642 | 100% | 57.13 | 705 / 705 |
thymus | 100% | 3893.73 | 653 / 653 | 100% | 58.55 | 602 / 605 |
liver | 100% | 2738.62 | 226 / 226 | 99% | 52.79 | 402 / 406 |
ovary | 100% | 4528.81 | 180 / 180 | 98% | 47.96 | 423 / 430 |
skin | 100% | 2132.93 | 1805 / 1809 | 99% | 55.40 | 465 / 472 |
pancreas | 99% | 4525.34 | 326 / 328 | 99% | 33.43 | 176 / 178 |
breast | 100% | 2377.07 | 458 / 459 | 98% | 49.09 | 1099 / 1118 |
bladder | 100% | 3116.43 | 21 / 21 | 98% | 44.23 | 493 / 504 |
uterus | 100% | 3458.50 | 170 / 170 | 97% | 42.21 | 446 / 459 |
kidney | 100% | 2532.69 | 89 / 89 | 97% | 34.21 | 873 / 901 |
adrenal gland | 100% | 3434.39 | 258 / 258 | 96% | 35.90 | 220 / 230 |
intestine | 100% | 2815.57 | 966 / 966 | 95% | 37.09 | 499 / 527 |
lung | 99% | 1923.33 | 572 / 578 | 94% | 35.06 | 1080 / 1155 |
stomach | 99% | 2453.89 | 356 / 359 | 92% | 35.00 | 263 / 286 |
esophagus | 100% | 2575.56 | 1443 / 1445 | 85% | 27.96 | 156 / 183 |
eye | 0% | 0 | 0 / 0 | 100% | 101.74 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 48.57 | 29 / 29 |
spleen | 100% | 3186.18 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 29.57 | 1 / 1 |
blood vessel | 100% | 1971.24 | 1329 / 1335 | 0% | 0 | 0 / 0 |
muscle | 99% | 2328.30 | 796 / 803 | 0% | 0 | 0 / 0 |
adipose | 99% | 1934.67 | 1188 / 1204 | 0% | 0 | 0 / 0 |
heart | 98% | 1902.60 | 841 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 91% | 29.63 | 41 / 45 |
peripheral blood | 88% | 1631.38 | 821 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0016558 | Biological process | protein import into peroxisome matrix |
GO_0016562 | Biological process | protein import into peroxisome matrix, receptor recycling |
GO_0043335 | Biological process | protein unfolding |
GO_0050821 | Biological process | protein stabilization |
GO_0007031 | Biological process | peroxisome organization |
GO_0016561 | Biological process | protein import into peroxisome matrix, translocation |
GO_0006625 | Biological process | protein targeting to peroxisome |
GO_0005778 | Cellular component | peroxisomal membrane |
GO_0001750 | Cellular component | photoreceptor outer segment |
GO_0005777 | Cellular component | peroxisome |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0097733 | Cellular component | photoreceptor cell cilium |
GO_0044877 | Molecular function | protein-containing complex binding |
GO_0140318 | Molecular function | protein transporter activity |
GO_0005524 | Molecular function | ATP binding |
GO_0005515 | Molecular function | protein binding |
GO_0140036 | Molecular function | ubiquitin-modified protein reader activity |
GO_0016887 | Molecular function | ATP hydrolysis activity |
Gene name | PEX6 |
Protein name | Peroxisomal ATPase PEX6 (EC 3.6.4.-) (Peroxin-6) (Peroxisomal biogenesis factor 6) (Peroxisomal-type ATPase 1) (Peroxisome assembly factor 2) (PAF-2) |
Synonyms | PXAAA1 |
Description | FUNCTION: Component of the PEX1-PEX6 AAA ATPase complex, a protein dislocase complex that mediates the ATP-dependent extraction of the PEX5 receptor from peroxisomal membranes, an essential step for PEX5 recycling . Specifically recognizes PEX5 monoubiquitinated at 'Cys-11', and pulls it out of the peroxisome lumen through the PEX2-PEX10-PEX12 retrotranslocation channel . Extraction by the PEX1-PEX6 AAA ATPase complex is accompanied by unfolding of the TPR repeats and release of bound cargo from PEX5 . . |
Accessions | Q13608 ENST00000244546.4 [Q13608-2] ENST00000304611.13 [Q13608-1] |