Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 5 studies | 30% ± 11% | |
endothelial cell | 4 studies | 20% ± 5% | |
ciliated cell | 3 studies | 25% ± 5% | |
GABAergic neuron | 3 studies | 27% ± 4% | |
glutamatergic neuron | 3 studies | 37% ± 6% | |
basal cell | 3 studies | 23% ± 6% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 26% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1390.63 | 1445 / 1445 | 100% | 25.49 | 183 / 183 |
lung | 100% | 1311.77 | 578 / 578 | 100% | 29.02 | 1155 / 1155 |
ovary | 100% | 1177.42 | 180 / 180 | 100% | 17.09 | 430 / 430 |
breast | 100% | 1397.76 | 459 / 459 | 100% | 31.12 | 1117 / 1118 |
intestine | 100% | 1302.76 | 966 / 966 | 100% | 20.60 | 526 / 527 |
bladder | 100% | 1375.29 | 21 / 21 | 100% | 29.70 | 503 / 504 |
prostate | 100% | 1547.92 | 245 / 245 | 100% | 28.73 | 501 / 502 |
uterus | 100% | 1182.42 | 170 / 170 | 100% | 27.85 | 458 / 459 |
liver | 100% | 1802.25 | 226 / 226 | 100% | 15.43 | 404 / 406 |
thymus | 100% | 1715.02 | 653 / 653 | 100% | 21.36 | 602 / 605 |
pancreas | 100% | 824.58 | 328 / 328 | 99% | 20.27 | 177 / 178 |
brain | 99% | 730.91 | 2627 / 2642 | 100% | 13.25 | 705 / 705 |
stomach | 100% | 1122.00 | 359 / 359 | 99% | 19.85 | 284 / 286 |
kidney | 100% | 1089.37 | 89 / 89 | 98% | 14.64 | 880 / 901 |
adrenal gland | 100% | 1294.07 | 258 / 258 | 97% | 11.69 | 222 / 230 |
skin | 100% | 1436.50 | 1809 / 1809 | 92% | 10.93 | 436 / 472 |
adipose | 100% | 1276.36 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1187.12 | 1335 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 859.41 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 20.60 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 30.43 | 1 / 1 |
muscle | 100% | 1431.53 | 802 / 803 | 0% | 0 | 0 / 0 |
heart | 98% | 1003.75 | 840 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 97% | 9.56 | 28 / 29 |
peripheral blood | 74% | 547.47 | 690 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 51% | 3.90 | 41 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0060152 | Biological process | microtubule-based peroxisome localization |
GO_0001561 | Biological process | fatty acid alpha-oxidation |
GO_0001764 | Biological process | neuron migration |
GO_0034614 | Biological process | cellular response to reactive oxygen species |
GO_0021795 | Biological process | cerebral cortex cell migration |
GO_0007626 | Biological process | locomotory behavior |
GO_0016561 | Biological process | protein import into peroxisome matrix, translocation |
GO_0016560 | Biological process | protein import into peroxisome matrix, docking |
GO_0001967 | Biological process | suckling behavior |
GO_0005778 | Cellular component | peroxisomal membrane |
GO_1990429 | Cellular component | peroxisomal importomer complex |
GO_0005829 | Cellular component | cytosol |
GO_0005777 | Cellular component | peroxisome |
GO_0016020 | Cellular component | membrane |
GO_0008320 | Molecular function | protein transmembrane transporter activity |
GO_0005515 | Molecular function | protein binding |
Gene name | PEX13 |
Protein name | Peroxisomal membrane protein PEX13 (Peroxin-13) Peroxisomal biogenesis factor 13 (Peroxisome biogenesis factor 13, isoform CRA_e) Peroxisomal biogenesis factor 13 (Peroxisome biogenesis factor 13, isoform CRA_a) Peroxisomal biogenesis factor 13 (Peroxisome biogenesis factor 13, isoform CRA_d) |
Synonyms | hCG_15153 |
Description | FUNCTION: Component of the PEX13-PEX14 docking complex, a translocon channel that specifically mediates the import of peroxisomal cargo proteins bound to PEX5 receptor . The PEX13-PEX14 docking complex forms a large import pore which can be opened to a diameter of about 9 nm (By similarity). Mechanistically, PEX5 receptor along with cargo proteins associates with the PEX14 subunit of the PEX13-PEX14 docking complex in the cytosol, leading to the insertion of the receptor into the organelle membrane with the concomitant translocation of the cargo into the peroxisome matrix . Involved in the import of PTS1- and PTS2-type containing proteins . . |
Accessions | D3YTD3 ENST00000444100.2 B5MBY9 G5E9N6 Q92968 ENST00000414712.2 ENST00000295030.6 ENST00000401576.1 |