Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 6 studies | 30% ± 7% | |
epithelial cell | 5 studies | 26% ± 7% | |
GABAergic neuron | 4 studies | 44% ± 15% | |
astrocyte | 4 studies | 30% ± 6% | |
glutamatergic neuron | 4 studies | 46% ± 17% | |
endothelial cell | 3 studies | 25% ± 6% | |
ciliated cell | 3 studies | 19% ± 3% | |
oligodendrocyte precursor cell | 3 studies | 30% ± 5% | |
interneuron | 3 studies | 43% ± 21% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 46% ± 10% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
stomach | 100% | 1312.20 | 359 / 359 | 100% | 10.53 | 285 / 286 |
esophagus | 100% | 1337.02 | 1444 / 1445 | 99% | 12.83 | 182 / 183 |
breast | 100% | 1859.65 | 459 / 459 | 99% | 11.63 | 1109 / 1118 |
lung | 100% | 1275.03 | 576 / 578 | 99% | 9.28 | 1149 / 1155 |
brain | 99% | 1169.54 | 2607 / 2642 | 100% | 8.91 | 702 / 705 |
prostate | 100% | 1529.63 | 245 / 245 | 98% | 9.33 | 493 / 502 |
intestine | 100% | 1658.60 | 966 / 966 | 98% | 9.44 | 517 / 527 |
ovary | 100% | 1929.11 | 180 / 180 | 98% | 5.71 | 421 / 430 |
bladder | 100% | 1479.48 | 21 / 21 | 98% | 7.51 | 492 / 504 |
thymus | 100% | 1983.30 | 653 / 653 | 97% | 7.16 | 588 / 605 |
pancreas | 100% | 1231.07 | 327 / 328 | 97% | 6.40 | 173 / 178 |
uterus | 100% | 1732.42 | 170 / 170 | 96% | 6.97 | 442 / 459 |
kidney | 100% | 1333.03 | 89 / 89 | 95% | 8.01 | 857 / 901 |
skin | 100% | 1896.77 | 1809 / 1809 | 93% | 7.73 | 439 / 472 |
adrenal gland | 100% | 1486.50 | 258 / 258 | 88% | 5.36 | 203 / 230 |
liver | 100% | 823.35 | 226 / 226 | 88% | 4.64 | 357 / 406 |
adipose | 100% | 1528.34 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1516.92 | 1335 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 1354.38 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 2.91 | 1 / 1 |
muscle | 100% | 1237.46 | 802 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 96% | 6.81 | 43 / 45 |
heart | 95% | 1051.80 | 814 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 86% | 4.25 | 25 / 29 |
peripheral blood | 61% | 463.14 | 571 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 59% | 2.65 | 47 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006625 | Biological process | protein targeting to peroxisome |
GO_0060152 | Biological process | microtubule-based peroxisome localization |
GO_0016558 | Biological process | protein import into peroxisome matrix |
GO_0016562 | Biological process | protein import into peroxisome matrix, receptor recycling |
GO_0007031 | Biological process | peroxisome organization |
GO_0043335 | Biological process | protein unfolding |
GO_0005778 | Cellular component | peroxisomal membrane |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005829 | Cellular component | cytosol |
GO_0005777 | Cellular component | peroxisome |
GO_0005737 | Cellular component | cytoplasm |
GO_0044877 | Molecular function | protein-containing complex binding |
GO_0140036 | Molecular function | ubiquitin-modified protein reader activity |
GO_0005515 | Molecular function | protein binding |
GO_0140318 | Molecular function | protein transporter activity |
GO_0016887 | Molecular function | ATP hydrolysis activity |
GO_0005524 | Molecular function | ATP binding |
Gene name | PEX1 |
Protein name | Peroxisomal biogenesis factor 1 Peroxisomal ATPase PEX1 (EC 3.6.4.-) (Peroxin-1) (Peroxisome biogenesis disorder protein 1) (Peroxisome biogenesis factor 1) Peroxisomal ATPase PEX1 (Peroxin-1) |
Synonyms | hCG_19541 |
Description | FUNCTION: Component of the PEX1-PEX6 AAA ATPase complex, a protein dislocase complex that mediates the ATP-dependent extraction of the PEX5 receptor from peroxisomal membranes, an essential step for PEX5 recycling . Specifically recognizes PEX5 monoubiquitinated at 'Cys-11', and pulls it out of the peroxisome lumen through the PEX2-PEX10-PEX12 retrotranslocation channel . Extraction by the PEX1-PEX6 AAA ATPase complex is accompanied by unfolding of the TPR repeats and release of bound cargo from PEX5 . . |
Accessions | ENST00000248633.9 [O43933-1] ENST00000438045.5 [O43933-2] A0A0C4DG33 ENST00000428214.5 O43933 H7BZH3 ENST00000422866.1 |