Name | Number of supported studies | Average coverage | |
---|---|---|---|
type I pneumocyte | 10 studies | 41% ± 18% | |
fibroblast | 9 studies | 28% ± 9% | |
pericyte | 7 studies | 19% ± 4% | |
endothelial cell | 6 studies | 21% ± 5% | |
smooth muscle cell | 5 studies | 24% ± 4% | |
epithelial cell | 5 studies | 34% ± 13% | |
basal cell | 4 studies | 24% ± 5% | |
GABAergic neuron | 4 studies | 41% ± 13% | |
ionocyte | 3 studies | 22% ± 5% | |
neuron | 3 studies | 25% ± 6% | |
retinal ganglion cell | 3 studies | 54% ± 17% | |
ciliated cell | 3 studies | 19% ± 4% | |
Mueller cell | 3 studies | 21% ± 5% | |
glutamatergic neuron | 3 studies | 49% ± 16% | |
connective tissue cell | 3 studies | 28% ± 10% | |
astrocyte | 3 studies | 22% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 4684.04 | 245 / 245 | 100% | 94.14 | 502 / 502 |
breast | 100% | 6936.07 | 459 / 459 | 100% | 90.42 | 1114 / 1118 |
esophagus | 100% | 6392.07 | 1443 / 1445 | 99% | 63.77 | 182 / 183 |
ovary | 100% | 5660.26 | 180 / 180 | 99% | 44.86 | 426 / 430 |
lung | 99% | 6068.05 | 573 / 578 | 100% | 69.47 | 1152 / 1155 |
kidney | 100% | 5714.20 | 89 / 89 | 99% | 87.77 | 888 / 901 |
uterus | 100% | 7034.75 | 170 / 170 | 98% | 50.44 | 452 / 459 |
bladder | 100% | 6012.00 | 21 / 21 | 98% | 50.33 | 494 / 504 |
intestine | 100% | 5286.49 | 965 / 966 | 98% | 42.02 | 514 / 527 |
thymus | 100% | 6556.66 | 653 / 653 | 97% | 109.26 | 584 / 605 |
brain | 97% | 3301.11 | 2557 / 2642 | 100% | 54.54 | 702 / 705 |
liver | 98% | 5320.63 | 221 / 226 | 98% | 66.62 | 399 / 406 |
skin | 100% | 6336.28 | 1805 / 1809 | 96% | 50.81 | 452 / 472 |
stomach | 99% | 4216.13 | 356 / 359 | 96% | 47.80 | 275 / 286 |
adrenal gland | 98% | 5401.47 | 253 / 258 | 96% | 86.10 | 221 / 230 |
pancreas | 92% | 2044.84 | 302 / 328 | 99% | 47.00 | 176 / 178 |
adipose | 100% | 8560.07 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 8853.59 | 1335 / 1335 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 18.64 | 1 / 1 |
muscle | 99% | 4239.36 | 794 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 96% | 44.97 | 43 / 45 |
spleen | 95% | 2232.32 | 229 / 241 | 0% | 0 | 0 / 0 |
heart | 95% | 4547.90 | 815 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 94% | 36.35 | 75 / 80 |
lymph node | 0% | 0 | 0 / 0 | 48% | 8.81 | 14 / 29 |
peripheral blood | 16% | 241.40 | 149 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0030327 | Biological process | prenylated protein catabolic process |
GO_0030328 | Biological process | prenylcysteine catabolic process |
GO_0005764 | Cellular component | lysosome |
GO_0070062 | Cellular component | extracellular exosome |
GO_0034361 | Cellular component | very-low-density lipoprotein particle |
GO_0102149 | Molecular function | farnesylcysteine lyase activity |
GO_0071949 | Molecular function | FAD binding |
GO_0001735 | Molecular function | prenylcysteine oxidase activity |
GO_0005515 | Molecular function | protein binding |
Gene name | PCYOX1 |
Protein name | Prenylcysteine oxidase 1 (EC 1.8.3.5) (Prenylcysteine lyase) Prenylcysteine oxidase 1 (EC 1.8.3.5) Uncharacterized protein PCYOX1 |
Synonyms | UNQ597/PRO1183 KIAA0908 PCL1 |
Description | FUNCTION: Prenylcysteine oxidase that cleaves the thioether bond of prenyl-L-cysteines, such as farnesylcysteine and geranylgeranylcysteine . Only active against free prenylcysteines and not prenylcysteine residues within prenylated proteins or peptides (By similarity). Involved in the final step in the degradation of prenylated proteins, by degrading prenylcysteines after the protein has been degraded . . |
Accessions | ENST00000422380.5 Q9UHG3 C9K055 ENST00000451279.1 ENST00000414812.5 C9JGT6 Q584P1 ENST00000433351.7 [Q9UHG3-1] Q53ST0 ENST00000264441.9 F8W8W4 C9JM55 |