Insufficient scRNA-seq data for expression of PCDHB9 at single-cell level.
Insufficient scRNA-seq data for expression of PCDHB9 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 99% | 103.04 | 2619 / 2642 | 99% | 14.08 | 701 / 705 |
kidney | 98% | 66.83 | 87 / 89 | 75% | 2.73 | 677 / 901 |
uterus | 99% | 242.08 | 169 / 170 | 72% | 3.66 | 330 / 459 |
pancreas | 86% | 41.49 | 281 / 328 | 80% | 2.31 | 143 / 178 |
breast | 100% | 151.20 | 459 / 459 | 65% | 2.35 | 730 / 1118 |
esophagus | 90% | 83.15 | 1294 / 1445 | 74% | 2.50 | 136 / 183 |
prostate | 96% | 87.70 | 234 / 245 | 62% | 1.95 | 313 / 502 |
lung | 100% | 133.87 | 577 / 578 | 58% | 1.57 | 668 / 1155 |
ovary | 100% | 221.60 | 180 / 180 | 57% | 1.72 | 245 / 430 |
bladder | 95% | 98.52 | 20 / 21 | 59% | 1.83 | 299 / 504 |
adrenal gland | 81% | 37.59 | 208 / 258 | 65% | 1.93 | 149 / 230 |
intestine | 90% | 96.21 | 873 / 966 | 53% | 1.48 | 281 / 527 |
thymus | 99% | 87.20 | 645 / 653 | 21% | 0.42 | 125 / 605 |
skin | 79% | 64.02 | 1430 / 1809 | 39% | 1.21 | 185 / 472 |
stomach | 63% | 50.16 | 227 / 359 | 49% | 1.28 | 140 / 286 |
adipose | 100% | 115.98 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 213.67 | 1334 / 1335 | 0% | 0 | 0 / 0 |
heart | 97% | 83.23 | 832 / 861 | 0% | 0 | 0 / 0 |
spleen | 89% | 44.73 | 215 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 78% | 3.24 | 35 / 45 |
muscle | 56% | 22.69 | 453 / 803 | 0% | 0 | 0 / 0 |
liver | 11% | 3.19 | 25 / 226 | 14% | 0.44 | 58 / 406 |
eye | 0% | 0 | 0 / 0 | 13% | 0.20 | 10 / 80 |
lymph node | 0% | 0 | 0 / 0 | 3% | 0.05 | 1 / 29 |
peripheral blood | 0% | 0.07 | 2 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007416 | Biological process | synapse assembly |
GO_0007156 | Biological process | homophilic cell adhesion via plasma membrane adhesion molecules |
GO_0007155 | Biological process | cell adhesion |
GO_0007268 | Biological process | chemical synaptic transmission |
GO_0016339 | Biological process | calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules |
GO_0045202 | Cellular component | synapse |
GO_0005886 | Cellular component | plasma membrane |
GO_0016020 | Cellular component | membrane |
GO_0005509 | Molecular function | calcium ion binding |
Gene name | PCDHB9 |
Protein name | Alternative protein PCDHB9 Protocadherin beta-9 (PCDH-beta-9) (Protocadherin-3H) Protocadherin beta 9 PCDHB9 protein |
Synonyms | PCDH3H |
Description | FUNCTION: Potential calcium-dependent cell-adhesion protein. May be involved in the establishment and maintenance of specific neuronal connections in the brain. |
Accessions | Q3ZB85 Q9Y5E1 L8E8J0 ENST00000708374.1 A0A096LP50 ENST00000624909.1 ENST00000316105.7 |