Insufficient scRNA-seq data for expression of PCDHB2 at single-cell level.
Insufficient scRNA-seq data for expression of PCDHB2 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 139.32 | 180 / 180 | 76% | 5.88 | 328 / 430 |
prostate | 98% | 103.30 | 241 / 245 | 77% | 4.99 | 388 / 502 |
brain | 99% | 113.38 | 2606 / 2642 | 72% | 6.88 | 506 / 705 |
breast | 100% | 227.88 | 459 / 459 | 63% | 3.55 | 705 / 1118 |
lung | 100% | 169.03 | 578 / 578 | 59% | 2.55 | 682 / 1155 |
esophagus | 98% | 89.25 | 1416 / 1445 | 50% | 2.15 | 92 / 183 |
thymus | 100% | 113.44 | 650 / 653 | 48% | 1.72 | 291 / 605 |
kidney | 97% | 73.82 | 86 / 89 | 48% | 1.94 | 428 / 901 |
skin | 98% | 116.56 | 1781 / 1809 | 41% | 2.38 | 195 / 472 |
bladder | 100% | 97.81 | 21 / 21 | 39% | 1.96 | 198 / 504 |
pancreas | 83% | 41.49 | 272 / 328 | 51% | 1.33 | 90 / 178 |
uterus | 99% | 148.21 | 169 / 170 | 32% | 3.03 | 149 / 459 |
adrenal gland | 62% | 27.78 | 160 / 258 | 51% | 2.24 | 118 / 230 |
intestine | 95% | 147.69 | 918 / 966 | 17% | 0.47 | 92 / 527 |
adipose | 100% | 183.68 | 1203 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 126.35 | 1329 / 1335 | 0% | 0 | 0 / 0 |
heart | 99% | 96.87 | 849 / 861 | 0% | 0 | 0 / 0 |
stomach | 73% | 51.25 | 261 / 359 | 25% | 0.77 | 72 / 286 |
spleen | 81% | 44.26 | 195 / 241 | 0% | 0 | 0 / 0 |
muscle | 76% | 35.55 | 611 / 803 | 0% | 0 | 0 / 0 |
liver | 4% | 1.29 | 9 / 226 | 18% | 0.70 | 74 / 406 |
tonsil | 0% | 0 | 0 / 0 | 9% | 0.23 | 4 / 45 |
eye | 0% | 0 | 0 / 0 | 9% | 0.21 | 7 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007416 | Biological process | synapse assembly |
GO_0007156 | Biological process | homophilic cell adhesion via plasma membrane adhesion molecules |
GO_0007155 | Biological process | cell adhesion |
GO_0007268 | Biological process | chemical synaptic transmission |
GO_0007399 | Biological process | nervous system development |
GO_0016339 | Biological process | calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules |
GO_0045202 | Cellular component | synapse |
GO_0005886 | Cellular component | plasma membrane |
GO_0016020 | Cellular component | membrane |
GO_0005509 | Molecular function | calcium ion binding |
Gene name | PCDHB2 |
Protein name | Protocadherin beta-2 (PCDH-beta-2) Protocadherin beta 2 |
Synonyms | |
Description | FUNCTION: Potential calcium-dependent cell-adhesion protein. May be involved in the establishment and maintenance of specific neuronal connections in the brain. |
Accessions | A0A096LP37 ENST00000625033.1 ENST00000194155.7 Q9Y5E7 A0A096LNX2 Q4KMG6 ENST00000624874.1 ENST00000622947.1 ENST00000708339.1 A0A096LNI2 |