Insufficient scRNA-seq data for expression of PCDHA4 at single-cell level.
Insufficient scRNA-seq data for expression of PCDHA4 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 94% | 59.34 | 2488 / 2642 | 31% | 0.88 | 221 / 705 |
kidney | 94% | 35.07 | 84 / 89 | 16% | 0.36 | 143 / 901 |
lung | 97% | 48.92 | 562 / 578 | 12% | 0.22 | 135 / 1155 |
pancreas | 98% | 88.42 | 323 / 328 | 10% | 0.19 | 18 / 178 |
breast | 89% | 36.77 | 407 / 459 | 19% | 0.37 | 215 / 1118 |
uterus | 94% | 32.27 | 160 / 170 | 12% | 0.24 | 56 / 459 |
ovary | 93% | 23.99 | 167 / 180 | 13% | 0.24 | 56 / 430 |
intestine | 92% | 23.17 | 885 / 966 | 9% | 0.16 | 45 / 527 |
bladder | 86% | 24.76 | 18 / 21 | 7% | 0.14 | 34 / 504 |
prostate | 73% | 14.94 | 178 / 245 | 20% | 0.39 | 99 / 502 |
blood vessel | 89% | 19.80 | 1184 / 1335 | 0% | 0 | 0 / 0 |
thymus | 82% | 15.95 | 535 / 653 | 1% | 0.02 | 9 / 605 |
adipose | 83% | 16.96 | 994 / 1204 | 0% | 0 | 0 / 0 |
stomach | 70% | 12.88 | 251 / 359 | 7% | 0.16 | 21 / 286 |
esophagus | 68% | 11.55 | 989 / 1445 | 6% | 0.12 | 11 / 183 |
skin | 59% | 9.41 | 1074 / 1809 | 4% | 0.06 | 19 / 472 |
adrenal gland | 42% | 6.36 | 109 / 258 | 16% | 0.59 | 36 / 230 |
spleen | 35% | 5.27 | 85 / 241 | 0% | 0 | 0 / 0 |
heart | 28% | 3.57 | 243 / 861 | 0% | 0 | 0 / 0 |
muscle | 7% | 0.73 | 56 / 803 | 0% | 0 | 0 / 0 |
liver | 6% | 0.57 | 14 / 226 | 0% | 0.01 | 2 / 406 |
tonsil | 0% | 0 | 0 / 0 | 7% | 0.09 | 3 / 45 |
peripheral blood | 3% | 0.41 | 29 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007399 | Biological process | nervous system development |
GO_0007156 | Biological process | homophilic cell adhesion via plasma membrane adhesion molecules |
GO_0007155 | Biological process | cell adhesion |
GO_0005886 | Cellular component | plasma membrane |
GO_0005509 | Molecular function | calcium ion binding |
GO_0042802 | Molecular function | identical protein binding |
GO_0005515 | Molecular function | protein binding |
Gene name | PCDHA4 |
Protein name | Protocadherin alpha 4 Protocadherin alpha-4 (PCDH-alpha-4) |
Synonyms | |
Description | FUNCTION: Calcium-dependent cell-adhesion protein involved in cells self-recognition and non-self discrimination. Thereby, it is involved in the establishment and maintenance of specific neuronal connections in the brain. . |
Accessions | Q9UN74 ENST00000618834.1 [Q9UN74-2] ENST00000708295.1 [Q9UN74-1] D6RA20 A0A5F9ZHY0 ENST00000512229.6 ENST00000708294.1 [Q9UN74-2] ENST00000530339.2 [Q9UN74-1] ENST00000672575.1 |