Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| astrocyte | 9 studies | 34% ± 13% | |
| glutamatergic neuron | 9 studies | 47% ± 24% | |
| retinal cone cell | 6 studies | 24% ± 6% | |
| GABAergic neuron | 5 studies | 62% ± 17% | |
| B cell | 4 studies | 30% ± 13% | |
| epithelial cell | 4 studies | 26% ± 16% | |
| adipocyte | 4 studies | 19% ± 1% | |
| neuron | 3 studies | 25% ± 2% | |
| interneuron | 3 studies | 61% ± 7% | |
| oligodendrocyte precursor cell | 3 studies | 22% ± 10% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 6 studies | 43% ± 25% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| brain | 99% | 1437.68 | 2621 / 2642 | 97% | 13.27 | 683 / 705 |
| prostate | 97% | 549.07 | 237 / 245 | 98% | 7.84 | 490 / 502 |
| liver | 100% | 671.53 | 225 / 226 | 92% | 7.13 | 374 / 406 |
| kidney | 99% | 811.22 | 88 / 89 | 87% | 10.75 | 788 / 901 |
| thymus | 100% | 1044.24 | 650 / 653 | 84% | 3.78 | 508 / 605 |
| lung | 96% | 542.31 | 556 / 578 | 87% | 5.60 | 1006 / 1155 |
| esophagus | 98% | 565.80 | 1412 / 1445 | 82% | 6.02 | 150 / 183 |
| pancreas | 100% | 915.63 | 328 / 328 | 78% | 4.13 | 139 / 178 |
| ovary | 100% | 1418.48 | 180 / 180 | 78% | 3.30 | 335 / 430 |
| uterus | 98% | 537.06 | 167 / 170 | 78% | 4.33 | 357 / 459 |
| stomach | 98% | 527.96 | 353 / 359 | 70% | 4.15 | 200 / 286 |
| skin | 98% | 786.66 | 1778 / 1809 | 68% | 4.15 | 323 / 472 |
| adrenal gland | 88% | 400.59 | 227 / 258 | 74% | 6.02 | 171 / 230 |
| intestine | 86% | 459.88 | 830 / 966 | 68% | 3.37 | 360 / 527 |
| bladder | 86% | 538.86 | 18 / 21 | 65% | 3.74 | 326 / 504 |
| breast | 100% | 1121.76 | 458 / 459 | 47% | 2.43 | 522 / 1118 |
| muscle | 100% | 1335.77 | 803 / 803 | 0% | 0 | 0 / 0 |
| blood vessel | 99% | 900.21 | 1324 / 1335 | 0% | 0 | 0 / 0 |
| adipose | 99% | 765.64 | 1190 / 1204 | 0% | 0 | 0 / 0 |
| spleen | 95% | 454.79 | 229 / 241 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 90% | 5.59 | 26 / 29 |
| tonsil | 0% | 0 | 0 / 0 | 67% | 2.83 | 30 / 45 |
| heart | 45% | 179.72 | 390 / 861 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 35% | 1.14 | 28 / 80 |
| peripheral blood | 26% | 557.64 | 242 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
| GO_0065003 | Biological process | protein-containing complex assembly |
| GO_0005911 | Cellular component | cell-cell junction |
| GO_0070062 | Cellular component | extracellular exosome |
| GO_0016020 | Cellular component | membrane |
| GO_0005886 | Cellular component | plasma membrane |
| GO_0005515 | Molecular function | protein binding |
| Gene name | PALS2 |
| Protein name | Protein PALS2 (MAGUK p55 subfamily member 6) (Membrane protein, palmitoylated 6) (Veli-associated MAGUK 1) (VAM-1) Protein associated with LIN7 2, MAGUK p55 family member Membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6), isoform CRA_a (Protein associated with LIN7 2, MAGUK p55 family member) |
| Synonyms | MPP6 hCG_38837 VAM1 |
| Description | |
| Accessions | ENST00000430180.5 ENST00000464384.2 R4GNA8 C9JGI8 ENST00000426450.1 ENST00000396475.6 C9J4Q3 ENST00000625307.1 ENST00000409761.5 Q9NZW5 F8WCD2 B8ZZG1 ENST00000222644.10 ENST00000432190.5 |
