Insufficient scRNA-seq data for expression of PABPC5 at single-cell level.
Insufficient scRNA-seq data for expression of PABPC5 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
adrenal gland | 100% | 511.20 | 258 / 258 | 93% | 4.40 | 213 / 230 |
prostate | 100% | 157.04 | 244 / 245 | 77% | 2.72 | 389 / 502 |
brain | 97% | 115.39 | 2570 / 2642 | 79% | 7.15 | 557 / 705 |
thymus | 100% | 165.53 | 652 / 653 | 67% | 1.45 | 403 / 605 |
skin | 76% | 112.08 | 1375 / 1809 | 74% | 3.70 | 351 / 472 |
breast | 100% | 148.11 | 457 / 459 | 49% | 1.43 | 545 / 1118 |
kidney | 78% | 59.92 | 69 / 89 | 45% | 1.02 | 407 / 901 |
ovary | 100% | 495.47 | 180 / 180 | 17% | 0.35 | 75 / 430 |
lung | 98% | 124.47 | 569 / 578 | 17% | 0.35 | 195 / 1155 |
uterus | 99% | 274.73 | 169 / 170 | 12% | 0.68 | 57 / 459 |
bladder | 100% | 186.95 | 21 / 21 | 9% | 0.16 | 45 / 504 |
blood vessel | 100% | 264.46 | 1335 / 1335 | 0% | 0 | 0 / 0 |
adipose | 99% | 166.78 | 1195 / 1204 | 0% | 0 | 0 / 0 |
intestine | 89% | 157.14 | 860 / 966 | 10% | 0.19 | 53 / 527 |
spleen | 98% | 104.89 | 237 / 241 | 0% | 0 | 0 / 0 |
esophagus | 85% | 162.37 | 1223 / 1445 | 8% | 0.15 | 15 / 183 |
heart | 83% | 88.59 | 717 / 861 | 0% | 0 | 0 / 0 |
stomach | 60% | 86.61 | 215 / 359 | 16% | 0.34 | 45 / 286 |
eye | 0% | 0 | 0 / 0 | 68% | 1.95 | 54 / 80 |
pancreas | 11% | 4.98 | 37 / 328 | 52% | 1.00 | 92 / 178 |
muscle | 43% | 22.23 | 349 / 803 | 0% | 0 | 0 / 0 |
liver | 5% | 2.53 | 12 / 226 | 4% | 0.12 | 18 / 406 |
lymph node | 0% | 0 | 0 / 0 | 7% | 0.12 | 2 / 29 |
tonsil | 0% | 0 | 0 / 0 | 2% | 0.08 | 1 / 45 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_1990904 | Cellular component | ribonucleoprotein complex |
GO_0005829 | Cellular component | cytosol |
GO_0005759 | Cellular component | mitochondrial matrix |
GO_0010494 | Cellular component | cytoplasmic stress granule |
GO_0005634 | Cellular component | nucleus |
GO_0008143 | Molecular function | poly(A) binding |
GO_0003730 | Molecular function | mRNA 3'-UTR binding |
GO_0008266 | Molecular function | poly(U) RNA binding |
GO_0005515 | Molecular function | protein binding |
Gene name | PABPC5 |
Protein name | Polyadenylate-binding protein 5 (PABP-5) (Poly(A)-binding protein 5) Poly(A) binding protein cytoplasmic 5 |
Synonyms | PABP5 |
Description | FUNCTION: Binds the poly(A) tail of mRNA. May be involved in cytoplasmic regulatory processes of mRNA metabolism. Can probably bind to cytoplasmic RNA sequences other than poly(A) in vivo (By similarity). . |
Accessions | ENST00000312600.4 [Q96DU9-1] Q96DU9 ENST00000373105.1 Q5JQF3 |