OVCH2 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
retinal rod cell	3 studies	39% ± 3%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
kidney	97%	144.52	86 / 89	11%	0.63	99 / 901
lung	92%	154.34	534 / 578	13%	0.32	149 / 1155
prostate	86%	187.38	210 / 245	12%	0.21	59 / 502
bladder	57%	103.67	12 / 21	30%	0.95	150 / 504
skin	74%	300.90	1343 / 1809	0%	0.00	1 / 472
breast	58%	164.76	266 / 459	15%	0.39	164 / 1118
blood vessel	33%	28.38	445 / 1335	0%	0	0 / 0
uterus	9%	3.67	16 / 170	16%	0.52	73 / 459
stomach	23%	9.76	81 / 359	1%	0.02	3 / 286
ovary	9%	3.37	17 / 180	12%	0.35	53 / 430
esophagus	8%	3.11	111 / 1445	6%	0.19	11 / 183
pancreas	3%	1.05	10 / 328	5%	0.10	9 / 178
adipose	7%	2.84	82 / 1204	0%	0	0 / 0
muscle	3%	0.91	28 / 803	0%	0	0 / 0
lymph node	0%	0	0 / 0	3%	0.04	1 / 29
thymus	0%	0.19	2 / 653	2%	0.14	11 / 605
heart	2%	1.65	13 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	1%	0.02	1 / 80
intestine	0%	0.07	1 / 966	1%	0.01	3 / 527
liver	0%	0	0 / 226	0%	0.01	2 / 406
brain	0%	0.01	1 / 2642	0%	0.00	1 / 705
peripheral blood	0%	0.03	1 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
adrenal gland	0%	0	0 / 258	0%	0	0 / 230
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
spleen	0%	0	0 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	0%	0	0 / 45
ureter	0%	0	0 / 0	0%	0	0 / 1