Insufficient scRNA-seq data for expression of OTOL1 at single-cell level.
Insufficient scRNA-seq data for expression of OTOL1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 30% | 1.57 | 785 / 2642 | 2% | 0.06 | 17 / 705 |
skin | 14% | 0.31 | 262 / 1809 | 9% | 1.08 | 43 / 472 |
adrenal gland | 5% | 0.10 | 14 / 258 | 3% | 0.84 | 6 / 230 |
blood vessel | 8% | 0.15 | 106 / 1335 | 0% | 0 | 0 / 0 |
uterus | 6% | 0.10 | 11 / 170 | 1% | 0.10 | 3 / 459 |
muscle | 7% | 0.13 | 56 / 803 | 0% | 0 | 0 / 0 |
breast | 7% | 0.12 | 31 / 459 | 0% | 0.00 | 2 / 1118 |
prostate | 6% | 0.17 | 15 / 245 | 0% | 0 | 0 / 502 |
stomach | 4% | 0.09 | 14 / 359 | 1% | 0.02 | 4 / 286 |
adipose | 5% | 0.09 | 63 / 1204 | 0% | 0 | 0 / 0 |
bladder | 5% | 0.10 | 1 / 21 | 0% | 0.00 | 1 / 504 |
liver | 5% | 0.09 | 11 / 226 | 0% | 0 | 0 / 406 |
lung | 4% | 0.09 | 26 / 578 | 0% | 0.01 | 3 / 1155 |
heart | 5% | 0.09 | 40 / 861 | 0% | 0 | 0 / 0 |
esophagus | 4% | 0.08 | 56 / 1445 | 1% | 0.02 | 1 / 183 |
pancreas | 4% | 0.07 | 14 / 328 | 0% | 0 | 0 / 178 |
intestine | 3% | 0.05 | 32 / 966 | 0% | 0.00 | 1 / 527 |
ovary | 3% | 0.06 | 6 / 180 | 0% | 0 | 0 / 430 |
thymus | 3% | 0.05 | 19 / 653 | 0% | 0 | 0 / 605 |
peripheral blood | 2% | 0.04 | 21 / 929 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 2% | 0.07 | 1 / 45 |
spleen | 2% | 0.05 | 5 / 241 | 0% | 0 | 0 / 0 |
kidney | 1% | 0.02 | 1 / 89 | 0% | 0 | 0 / 901 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0051260 | Biological process | protein homooligomerization |
GO_0030198 | Biological process | extracellular matrix organization |
GO_0045299 | Biological process | otolith mineralization |
GO_0005615 | Cellular component | extracellular space |
GO_0005581 | Cellular component | collagen trimer |
GO_0005576 | Cellular component | extracellular region |
GO_0062023 | Cellular component | collagen-containing extracellular matrix |
GO_0030020 | Molecular function | extracellular matrix structural constituent conferring tensile strength |
GO_0005509 | Molecular function | calcium ion binding |
Gene name | OTOL1 |
Protein name | Otolin-1 |
Synonyms | |
Description | FUNCTION: Collagen-like protein specifically expressed in the inner ear, which provides an organic scaffold for otoconia, a calcium carbonate structure in the saccule and utricle of the ear. Acts as a scaffold for biomineralization: sequesters calcium and forms interconnecting fibrils between otoconia that are incorporated into the calcium crystal structure. Together with OC90, modulates calcite crystal morphology and growth kinetics. . |
Accessions | A6NHN0 ENST00000327928.4 |