Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 7 studies | 41% ± 20% | |
GABAergic neuron | 7 studies | 40% ± 18% | |
endothelial cell | 6 studies | 28% ± 14% | |
interneuron | 6 studies | 33% ± 12% | |
epithelial cell | 5 studies | 27% ± 12% | |
macrophage | 4 studies | 19% ± 4% | |
hematopoietic precursor cell | 3 studies | 21% ± 2% | |
non-classical monocyte | 3 studies | 19% ± 5% | |
GABAergic interneuron | 3 studies | 27% ± 13% | |
microglial cell | 3 studies | 23% ± 6% | |
retinal ganglion cell | 3 studies | 21% ± 1% | |
retinal bipolar neuron | 3 studies | 19% ± 2% | |
dendritic cell | 3 studies | 30% ± 3% | |
transit amplifying cell | 3 studies | 45% ± 28% | |
astrocyte | 3 studies | 24% ± 8% | |
neuron | 3 studies | 39% ± 4% | |
oligodendrocyte | 3 studies | 22% ± 7% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2011.94 | 1445 / 1445 | 100% | 17.70 | 183 / 183 |
prostate | 100% | 1882.15 | 245 / 245 | 100% | 18.37 | 502 / 502 |
skin | 100% | 2688.45 | 1809 / 1809 | 100% | 32.73 | 472 / 472 |
uterus | 100% | 1975.55 | 170 / 170 | 100% | 22.21 | 459 / 459 |
lung | 100% | 1942.30 | 578 / 578 | 100% | 17.76 | 1154 / 1155 |
thymus | 100% | 3865.75 | 653 / 653 | 100% | 17.72 | 604 / 605 |
bladder | 100% | 1656.57 | 21 / 21 | 100% | 18.48 | 503 / 504 |
ovary | 100% | 1740.76 | 180 / 180 | 100% | 14.78 | 429 / 430 |
breast | 100% | 2000.00 | 459 / 459 | 100% | 15.86 | 1114 / 1118 |
intestine | 100% | 1815.92 | 966 / 966 | 99% | 17.31 | 524 / 527 |
stomach | 100% | 1377.24 | 358 / 359 | 100% | 15.68 | 285 / 286 |
brain | 99% | 2223.99 | 2621 / 2642 | 100% | 16.63 | 705 / 705 |
kidney | 100% | 1316.75 | 89 / 89 | 98% | 9.12 | 885 / 901 |
adrenal gland | 100% | 1750.71 | 258 / 258 | 97% | 10.49 | 223 / 230 |
pancreas | 97% | 783.84 | 319 / 328 | 99% | 12.27 | 176 / 178 |
liver | 64% | 423.40 | 145 / 226 | 75% | 5.16 | 303 / 406 |
adipose | 100% | 2011.66 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 17.57 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 32.49 | 29 / 29 |
spleen | 100% | 2687.46 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 20.12 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 12.73 | 1 / 1 |
blood vessel | 100% | 1787.43 | 1334 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 1498.90 | 800 / 803 | 0% | 0 | 0 / 0 |
heart | 95% | 1115.50 | 818 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 83% | 1703.25 | 770 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006913 | Biological process | nucleocytoplasmic transport |
GO_0006606 | Biological process | protein import into nucleus |
GO_0051292 | Biological process | nuclear pore complex assembly |
GO_0060391 | Biological process | positive regulation of SMAD protein signal transduction |
GO_0006998 | Biological process | nuclear envelope organization |
GO_0016973 | Biological process | poly(A)+ mRNA export from nucleus |
GO_0005813 | Cellular component | centrosome |
GO_0005829 | Cellular component | cytosol |
GO_0005643 | Cellular component | nuclear pore |
GO_0031965 | Cellular component | nuclear membrane |
GO_0034399 | Cellular component | nuclear periphery |
GO_0005635 | Cellular component | nuclear envelope |
GO_0016020 | Cellular component | membrane |
GO_0017056 | Molecular function | structural constituent of nuclear pore |
GO_0005515 | Molecular function | protein binding |
Gene name | NUP93 |
Protein name | Nuclear pore complex protein Nup93 (93 kDa nucleoporin) (Nucleoporin Nup93) Nucleoporin 93 Nuclear pore complex protein Nup93 |
Synonyms | KIAA0095 |
Description | FUNCTION: Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance . May anchor nucleoporins, but not NUP153 and TPR, to the NPC. During renal development, regulates podocyte migration and proliferation through SMAD4 signaling . . FUNCTION: Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance. . FUNCTION: Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance. . FUNCTION: Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance. . FUNCTION: Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance. . FUNCTION: Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance. . |
Accessions | ENST00000563405.1 H3BVG0 H3BNG7 H3BP95 ENST00000568656.5 ENST00000566678.1 ENST00000563858.5 H3BM93 ENST00000542526.5 [Q8N1F7-2] ENST00000562496.5 ENST00000308159.10 [Q8N1F7-1] H3BV15 H3BPA9 H3BP72 ENST00000567641.5 ENST00000566315.5 ENST00000568283.5 Q8N1F7 H3BRI8 H3BVE2 ENST00000563486.1 H3BRD9 ENST00000569842.5 H3BNN5 H3BMX0 ENST00000567081.5 ENST00000564887.5 [Q8N1F7-2] H3BV11 ENST00000569322.1 ENST00000569863.5 |