Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| epithelial cell | 5 studies | 19% ± 3% | |
| macrophage | 5 studies | 17% ± 1% | |
| GABAergic neuron | 3 studies | 22% ± 4% | |
| glutamatergic neuron | 3 studies | 32% ± 10% | |
| transit amplifying cell | 3 studies | 29% ± 7% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| bladder | 100% | 2611.71 | 21 / 21 | 100% | 38.45 | 504 / 504 |
| esophagus | 100% | 2462.99 | 1445 / 1445 | 100% | 30.94 | 183 / 183 |
| lung | 100% | 3194.60 | 578 / 578 | 100% | 31.38 | 1155 / 1155 |
| ovary | 100% | 3078.78 | 180 / 180 | 100% | 25.32 | 430 / 430 |
| stomach | 100% | 1984.70 | 359 / 359 | 100% | 28.36 | 286 / 286 |
| breast | 100% | 3208.27 | 459 / 459 | 100% | 33.60 | 1116 / 1118 |
| intestine | 100% | 2798.52 | 966 / 966 | 100% | 30.78 | 526 / 527 |
| skin | 100% | 2989.62 | 1809 / 1809 | 100% | 29.48 | 471 / 472 |
| uterus | 100% | 3390.65 | 170 / 170 | 100% | 47.46 | 458 / 459 |
| prostate | 100% | 3137.08 | 245 / 245 | 100% | 20.61 | 500 / 502 |
| thymus | 100% | 3024.32 | 653 / 653 | 100% | 21.52 | 602 / 605 |
| liver | 100% | 1713.75 | 226 / 226 | 99% | 20.56 | 403 / 406 |
| pancreas | 99% | 1629.82 | 326 / 328 | 99% | 25.82 | 177 / 178 |
| kidney | 100% | 2135.34 | 89 / 89 | 96% | 17.76 | 862 / 901 |
| adrenal gland | 100% | 1769.76 | 258 / 258 | 95% | 12.13 | 218 / 230 |
| brain | 94% | 1838.10 | 2478 / 2642 | 100% | 24.03 | 705 / 705 |
| adipose | 100% | 3050.59 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 100% | 37.52 | 29 / 29 |
| spleen | 100% | 3888.39 | 241 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 37.64 | 45 / 45 |
| ureter | 0% | 0 | 0 / 0 | 100% | 21.91 | 1 / 1 |
| blood vessel | 100% | 2344.13 | 1334 / 1335 | 0% | 0 | 0 / 0 |
| muscle | 99% | 1300.70 | 797 / 803 | 0% | 0 | 0 / 0 |
| heart | 99% | 1427.29 | 853 / 861 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 95% | 15.53 | 76 / 80 |
| peripheral blood | 93% | 1761.39 | 868 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0006913 | Biological process | nucleocytoplasmic transport |
| GO_0006406 | Biological process | mRNA export from nucleus |
| GO_0048246 | Biological process | macrophage chemotaxis |
| GO_0045893 | Biological process | positive regulation of DNA-templated transcription |
| GO_0006606 | Biological process | protein import into nucleus |
| GO_0072006 | Biological process | nephron development |
| GO_0030032 | Biological process | lamellipodium assembly |
| GO_0000776 | Cellular component | kinetochore |
| GO_0005654 | Cellular component | nucleoplasm |
| GO_0005829 | Cellular component | cytosol |
| GO_0005643 | Cellular component | nuclear pore |
| GO_0031965 | Cellular component | nuclear membrane |
| GO_0031080 | Cellular component | nuclear pore outer ring |
| GO_0005819 | Cellular component | spindle |
| GO_0005635 | Cellular component | nuclear envelope |
| GO_0016020 | Cellular component | membrane |
| GO_0017056 | Molecular function | structural constituent of nuclear pore |
| GO_0005515 | Molecular function | protein binding |
| Gene name | NUP85 |
| Protein name | Nuclear pore complex protein Nup85 Nucleoporin 85 Nuclear pore complex protein Nup85 (85 kDa nucleoporin) (FROUNT) (Nucleoporin Nup75) (Nucleoporin Nup85) (Pericentrin-1) |
| Synonyms | PCNT1 NUP75 |
| Description | FUNCTION: Essential component of the nuclear pore complex (NPC) that seems to be required for NPC assembly and maintenance . As part of the NPC Nup107-160 subcomplex plays a role in RNA export and in tethering NUP96/Nup98 and NUP153 to the nucleus . The Nup107-160 complex seems to be required for spindle assembly during mitosis . NUP85 is required for membrane clustering of CCL2-activated CCR2 . Seems to be involved in CCR2-mediated chemotaxis of monocytes and may link activated CCR2 to the phosphatidyl-inositol 3-kinase-Rac-lammellipodium protrusion cascade . Involved in nephrogenesis . . FUNCTION: Functions as a component of the nuclear pore complex (NPC). . FUNCTION: Functions as a component of the nuclear pore complex (NPC). . FUNCTION: Functions as a component of the nuclear pore complex (NPC). . FUNCTION: Functions as a component of the nuclear pore complex (NPC). . FUNCTION: Functions as a component of the nuclear pore complex (NPC). . FUNCTION: Functions as a component of the nuclear pore complex (NPC). . FUNCTION: Functions as a component of the nuclear pore complex (NPC). . FUNCTION: Functions as a component of the nuclear pore complex (NPC). . FUNCTION: Functions as a component of the nuclear pore complex (NPC). . FUNCTION: Functions as a component of the nuclear pore complex (NPC). . FUNCTION: Functions as a component of the nuclear pore complex (NPC). . FUNCTION: Functions as a component of the nuclear pore complex (NPC). . |
| Accessions | J3KT10 J3QL54 J3KTC7 ENST00000583569.5 ENST00000580879.5 J3KS87 J3QLH0 J3QLV0 Q9BW27 ENST00000579557.5 ENST00000578830.5 ENST00000583070.5 J3QL91 J3KRC0 J3QLD4 ENST00000245544.9 [Q9BW27-1] ENST00000584155.1 ENST00000579324.5 ENST00000579900.5 ENST00000583877.5 J3KSH3 ENST00000578987.1 F5H0W7 ENST00000540768.5 ENST00000581104.5 J3QRY3 ENST00000579298.5 J3QL49 ENST00000579838.1 J3QS63 |
