Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 3 studies | 20% ± 1% | |
transit amplifying cell | 3 studies | 25% ± 11% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
liver | 3 studies | 18% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
bladder | 100% | 1759.33 | 21 / 21 | 100% | 30.80 | 504 / 504 |
breast | 100% | 1979.63 | 459 / 459 | 100% | 40.23 | 1118 / 1118 |
esophagus | 100% | 1588.78 | 1445 / 1445 | 100% | 31.43 | 183 / 183 |
intestine | 100% | 1768.64 | 966 / 966 | 100% | 31.94 | 527 / 527 |
lung | 100% | 1659.36 | 578 / 578 | 100% | 28.64 | 1155 / 1155 |
prostate | 100% | 2170.84 | 245 / 245 | 100% | 30.51 | 502 / 502 |
thymus | 100% | 2130.62 | 653 / 653 | 100% | 27.30 | 604 / 605 |
uterus | 100% | 2045.76 | 170 / 170 | 100% | 36.14 | 458 / 459 |
ovary | 100% | 1744.18 | 180 / 180 | 100% | 21.27 | 429 / 430 |
stomach | 100% | 1494.18 | 359 / 359 | 100% | 30.93 | 285 / 286 |
brain | 100% | 1074.82 | 2630 / 2642 | 100% | 28.26 | 705 / 705 |
kidney | 100% | 1335.94 | 89 / 89 | 99% | 22.38 | 894 / 901 |
pancreas | 100% | 1339.46 | 327 / 328 | 99% | 20.84 | 177 / 178 |
adrenal gland | 100% | 1638.88 | 258 / 258 | 99% | 18.72 | 228 / 230 |
skin | 100% | 2096.83 | 1809 / 1809 | 97% | 27.04 | 460 / 472 |
liver | 100% | 988.92 | 226 / 226 | 96% | 14.82 | 390 / 406 |
adipose | 100% | 1571.18 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1562.11 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 37.13 | 29 / 29 |
muscle | 100% | 1488.08 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 2716.30 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 33.55 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 11.27 | 1 / 1 |
heart | 99% | 1147.90 | 851 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 90% | 1217.96 | 836 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 89% | 14.99 | 71 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006913 | Biological process | nucleocytoplasmic transport |
GO_0015031 | Biological process | protein transport |
GO_0051301 | Biological process | cell division |
GO_0051028 | Biological process | mRNA transport |
GO_0007059 | Biological process | chromosome segregation |
GO_0016607 | Cellular component | nuclear speck |
GO_0000776 | Cellular component | kinetochore |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0005643 | Cellular component | nuclear pore |
GO_0031080 | Cellular component | nuclear pore outer ring |
GO_0005635 | Cellular component | nuclear envelope |
GO_0005515 | Molecular function | protein binding |
Gene name | NUP43 |
Protein name | NUP43 protein Nucleoporin 43 (cDNA FLJ61080, highly similar to Nucleoporin Nup43) Nucleoporin 43 Nucleoporin 43 (cDNA FLJ54281, highly similar to Nucleoporin Nup43) Nucleoporin Nup43 (Nup107-160 subcomplex subunit Nup43) (p42) |
Synonyms | |
Description | FUNCTION: Component of the Nup107-160 subcomplex of the nuclear pore complex (NPC). The Nup107-160 subcomplex is required for the assembly of a functional NPC. The Nup107-160 subcomplex is also required for normal kinetochore microtubule attachment, mitotic progression and chromosome segregation. . |
Accessions | Q8NFH3 ENST00000367402.6 A0PJK4 ENST00000340413.7 [Q8NFH3-1] ENST00000403890.7 F5H0E3 ENST00000543637.1 ENST00000367404.8 [Q8NFH3-2] B4DVD1 B4E301 |