Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 5 studies | 26% ± 8% | |
endothelial cell | 4 studies | 24% ± 10% | |
microglial cell | 3 studies | 19% ± 1% | |
epithelial cell | 3 studies | 25% ± 8% | |
GABAergic neuron | 3 studies | 39% ± 5% | |
glutamatergic neuron | 3 studies | 45% ± 6% | |
oligodendrocyte precursor cell | 3 studies | 24% ± 6% | |
transit amplifying cell | 3 studies | 39% ± 22% | |
oligodendrocyte | 3 studies | 24% ± 4% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 5 studies | 30% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 3528.92 | 1445 / 1445 | 100% | 53.46 | 183 / 183 |
ovary | 100% | 3700.29 | 180 / 180 | 100% | 33.93 | 430 / 430 |
stomach | 100% | 2503.09 | 359 / 359 | 100% | 36.71 | 286 / 286 |
lung | 100% | 3172.28 | 578 / 578 | 100% | 40.00 | 1154 / 1155 |
intestine | 100% | 3287.41 | 966 / 966 | 100% | 36.09 | 525 / 527 |
breast | 100% | 3325.50 | 459 / 459 | 100% | 42.01 | 1113 / 1118 |
bladder | 100% | 3153.38 | 21 / 21 | 99% | 33.23 | 499 / 504 |
skin | 100% | 4719.95 | 1809 / 1809 | 99% | 48.32 | 467 / 472 |
uterus | 100% | 4137.61 | 170 / 170 | 99% | 38.33 | 454 / 459 |
thymus | 100% | 3100.82 | 653 / 653 | 98% | 20.15 | 593 / 605 |
prostate | 100% | 3012.42 | 245 / 245 | 98% | 23.17 | 492 / 502 |
brain | 97% | 1620.93 | 2567 / 2642 | 100% | 31.41 | 705 / 705 |
pancreas | 99% | 1479.42 | 324 / 328 | 98% | 20.98 | 175 / 178 |
kidney | 100% | 2124.47 | 89 / 89 | 95% | 20.53 | 858 / 901 |
adrenal gland | 100% | 2685.46 | 258 / 258 | 92% | 18.61 | 212 / 230 |
liver | 95% | 1030.04 | 214 / 226 | 73% | 10.67 | 298 / 406 |
adipose | 100% | 3019.82 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2820.48 | 1335 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 4127.75 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 43.16 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 8.81 | 1 / 1 |
muscle | 100% | 2014.06 | 801 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 97% | 31.54 | 28 / 29 |
heart | 96% | 1388.45 | 825 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 94% | 22.91 | 75 / 80 |
peripheral blood | 76% | 3263.97 | 708 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006913 | Biological process | nucleocytoplasmic transport |
GO_0015031 | Biological process | protein transport |
GO_0051292 | Biological process | nuclear pore complex assembly |
GO_0006999 | Biological process | nuclear pore organization |
GO_0051028 | Biological process | mRNA transport |
GO_0044611 | Cellular component | nuclear pore inner ring |
GO_0005829 | Cellular component | cytosol |
GO_0005643 | Cellular component | nuclear pore |
GO_0031965 | Cellular component | nuclear membrane |
GO_0034399 | Cellular component | nuclear periphery |
GO_0005635 | Cellular component | nuclear envelope |
GO_0016020 | Cellular component | membrane |
GO_0017056 | Molecular function | structural constituent of nuclear pore |
GO_0005515 | Molecular function | protein binding |
Gene name | NUP205 |
Protein name | Nucleoporin 205 Nuclear pore complex protein Nup205 (205 kDa nucleoporin) (Nucleoporin Nup205) NUP205 protein Alternative protein NUP205 |
Synonyms | C7orf14 KIAA0225 |
Description | FUNCTION: Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance . May anchor NUP62 and other nucleoporins, but not NUP153 and TPR, to the NPC . In association with TMEM209, may be involved in nuclear transport of various nuclear proteins in addition to MYC . . |
Accessions | U3KQ97 ENST00000285968.11 Q6P486 ENST00000477620.5 L8E861 Q6DKH1 U3KQH5 Q4VBX7 ENST00000463247.1 Q92621 U3KPX2 U3KQ47 ENST00000472132.5 ENST00000490439.1 |