Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 6 studies | 28% ± 6% | |
endothelial cell | 5 studies | 26% ± 7% | |
GABAergic neuron | 4 studies | 43% ± 15% | |
astrocyte | 4 studies | 28% ± 6% | |
glutamatergic neuron | 4 studies | 52% ± 22% | |
oligodendrocyte precursor cell | 4 studies | 24% ± 7% | |
interneuron | 4 studies | 36% ± 22% | |
microglial cell | 3 studies | 19% ± 1% | |
epithelial cell | 3 studies | 25% ± 4% | |
macrophage | 3 studies | 20% ± 4% | |
transit amplifying cell | 3 studies | 27% ± 13% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2739.73 | 1445 / 1445 | 100% | 32.34 | 183 / 183 |
lung | 100% | 2509.50 | 578 / 578 | 100% | 33.01 | 1155 / 1155 |
breast | 100% | 3337.63 | 459 / 459 | 100% | 54.38 | 1116 / 1118 |
brain | 100% | 2527.69 | 2633 / 2642 | 100% | 44.17 | 705 / 705 |
uterus | 100% | 3492.76 | 170 / 170 | 100% | 35.55 | 457 / 459 |
ovary | 100% | 3829.23 | 180 / 180 | 100% | 27.31 | 428 / 430 |
intestine | 100% | 2830.14 | 966 / 966 | 99% | 27.88 | 524 / 527 |
thymus | 100% | 2752.84 | 653 / 653 | 99% | 30.48 | 601 / 605 |
bladder | 100% | 2997.24 | 21 / 21 | 99% | 28.35 | 500 / 504 |
prostate | 100% | 2432.38 | 245 / 245 | 99% | 26.12 | 498 / 502 |
stomach | 100% | 2132.31 | 359 / 359 | 99% | 27.36 | 283 / 286 |
skin | 100% | 3587.82 | 1809 / 1809 | 98% | 39.67 | 464 / 472 |
pancreas | 99% | 1519.86 | 325 / 328 | 99% | 23.73 | 176 / 178 |
kidney | 100% | 1834.93 | 89 / 89 | 96% | 21.61 | 866 / 901 |
adrenal gland | 100% | 2730.55 | 258 / 258 | 93% | 21.09 | 215 / 230 |
liver | 98% | 948.07 | 222 / 226 | 95% | 17.57 | 386 / 406 |
adipose | 100% | 3124.94 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2844.71 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 27.61 | 29 / 29 |
muscle | 100% | 2722.90 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 2864.44 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 33.32 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 13.48 | 1 / 1 |
heart | 97% | 2134.02 | 835 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 96% | 23.70 | 77 / 80 |
peripheral blood | 77% | 1433.22 | 711 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006999 | Biological process | nuclear pore organization |
GO_0048339 | Biological process | paraxial mesoderm development |
GO_0061053 | Biological process | somite development |
GO_0006406 | Biological process | mRNA export from nucleus |
GO_0022008 | Biological process | neurogenesis |
GO_0072006 | Biological process | nephron development |
GO_0006606 | Biological process | protein import into nucleus |
GO_0006913 | Biological process | nucleocytoplasmic transport |
GO_0021915 | Biological process | neural tube development |
GO_0016973 | Biological process | poly(A)+ mRNA export from nucleus |
GO_0000972 | Biological process | transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery |
GO_0005643 | Cellular component | nuclear pore |
GO_0016020 | Cellular component | membrane |
GO_0000776 | Cellular component | kinetochore |
GO_0005635 | Cellular component | nuclear envelope |
GO_0005829 | Cellular component | cytosol |
GO_0031080 | Cellular component | nuclear pore outer ring |
GO_0031965 | Cellular component | nuclear membrane |
GO_0017056 | Molecular function | structural constituent of nuclear pore |
GO_0005515 | Molecular function | protein binding |
Gene name | NUP133 |
Protein name | Nuclear pore complex protein Nup133 (133 kDa nucleoporin) (Nucleoporin Nup133) |
Synonyms | |
Description | FUNCTION: Involved in poly(A)+ RNA transport. Involved in nephrogenesis . . |
Accessions | ENST00000261396.6 Q8WUM0 |