Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 7 studies | 22% ± 6% | |
adipocyte | 6 studies | 18% ± 3% | |
B cell | 5 studies | 20% ± 3% | |
epithelial cell | 5 studies | 26% ± 6% | |
macrophage | 5 studies | 18% ± 3% | |
glutamatergic neuron | 4 studies | 35% ± 11% | |
basal cell | 4 studies | 22% ± 8% | |
astrocyte | 4 studies | 25% ± 7% | |
oligodendrocyte | 4 studies | 22% ± 3% | |
microglial cell | 3 studies | 18% ± 2% | |
ciliated cell | 3 studies | 18% ± 2% | |
GABAergic neuron | 3 studies | 30% ± 2% | |
oligodendrocyte precursor cell | 3 studies | 21% ± 3% | |
CD4-positive, alpha-beta T cell | 3 studies | 16% ± 1% | |
dendritic cell | 3 studies | 21% ± 3% | |
natural killer cell | 3 studies | 18% ± 2% | |
transit amplifying cell | 3 studies | 42% ± 23% | |
interneuron | 3 studies | 28% ± 10% | |
neuron | 3 studies | 20% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1671.04 | 1445 / 1445 | 100% | 22.16 | 183 / 183 |
lung | 100% | 1779.24 | 578 / 578 | 100% | 21.00 | 1154 / 1155 |
breast | 100% | 2593.78 | 459 / 459 | 100% | 24.83 | 1116 / 1118 |
bladder | 100% | 1853.95 | 21 / 21 | 100% | 26.26 | 503 / 504 |
ovary | 100% | 2338.02 | 180 / 180 | 100% | 18.01 | 429 / 430 |
intestine | 100% | 1936.88 | 966 / 966 | 99% | 19.66 | 522 / 527 |
stomach | 100% | 1354.90 | 358 / 359 | 99% | 18.59 | 284 / 286 |
uterus | 100% | 2366.07 | 170 / 170 | 99% | 26.93 | 454 / 459 |
prostate | 100% | 1598.08 | 245 / 245 | 98% | 11.07 | 491 / 502 |
thymus | 100% | 1667.01 | 653 / 653 | 97% | 11.95 | 588 / 605 |
skin | 100% | 2414.25 | 1809 / 1809 | 97% | 20.71 | 456 / 472 |
pancreas | 99% | 1007.40 | 324 / 328 | 98% | 13.21 | 174 / 178 |
kidney | 100% | 1163.56 | 89 / 89 | 96% | 12.26 | 864 / 901 |
brain | 96% | 918.99 | 2549 / 2642 | 99% | 17.03 | 699 / 705 |
adrenal gland | 100% | 1584.38 | 258 / 258 | 93% | 9.94 | 215 / 230 |
liver | 99% | 835.54 | 224 / 226 | 85% | 8.88 | 347 / 406 |
adipose | 100% | 2402.28 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1819.32 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 23.04 | 29 / 29 |
spleen | 100% | 2506.54 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 28.77 | 45 / 45 |
muscle | 100% | 1173.78 | 801 / 803 | 0% | 0 | 0 / 0 |
heart | 97% | 1055.38 | 836 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 76% | 7.67 | 61 / 80 |
peripheral blood | 68% | 1376.78 | 634 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0006913 | Biological process | nucleocytoplasmic transport |
GO_0006406 | Biological process | mRNA export from nucleus |
GO_0006606 | Biological process | protein import into nucleus |
GO_0051292 | Biological process | nuclear pore complex assembly |
GO_0000973 | Biological process | post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery |
GO_0008585 | Biological process | female gonad development |
GO_0072006 | Biological process | nephron development |
GO_0000776 | Cellular component | kinetochore |
GO_0005829 | Cellular component | cytosol |
GO_0005643 | Cellular component | nuclear pore |
GO_0031965 | Cellular component | nuclear membrane |
GO_0034399 | Cellular component | nuclear periphery |
GO_0031080 | Cellular component | nuclear pore outer ring |
GO_0005635 | Cellular component | nuclear envelope |
GO_0016020 | Cellular component | membrane |
GO_0017056 | Molecular function | structural constituent of nuclear pore |
GO_0005515 | Molecular function | protein binding |
Gene name | NUP107 |
Protein name | Nucleoporin 107 Nuclear pore complex protein Nup107 (107 kDa nucleoporin) (Nucleoporin Nup107) Nuclear pore complex protein |
Synonyms | hCG_21433 |
Description | FUNCTION: Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance . Required for the assembly of peripheral proteins into the NPC . May anchor NUP62 to the NPC . Involved in nephrogenesis . . FUNCTION: Functions as a component of the nuclear pore complex (NPC). . |
Accessions | ENST00000535718.5 ENST00000538549.1 ENST00000229179.9 [P57740-1] F5GY77 ENST00000538993.1 ENST00000378905.6 [P57740-3] H0YG15 ENST00000539906.5 [P57740-2] P57740 G3V1T4 |