Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| glutamatergic neuron | 5 studies | 23% ± 7% | |
| non-classical monocyte | 4 studies | 22% ± 6% | |
| epithelial cell | 4 studies | 27% ± 10% | |
| ciliated cell | 4 studies | 21% ± 2% | |
| macrophage | 4 studies | 20% ± 3% | |
| classical monocyte | 3 studies | 23% ± 4% | |
| conventional dendritic cell | 3 studies | 30% ± 10% | |
| endothelial cell | 3 studies | 22% ± 5% | |
| dendritic cell | 3 studies | 37% ± 7% | |
| neuron | 3 studies | 18% ± 2% | |
| oligodendrocyte precursor cell | 3 studies | 21% ± 4% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 3 studies | 22% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| esophagus | 100% | 557.08 | 1445 / 1445 | 100% | 11.28 | 183 / 183 |
| ovary | 100% | 567.37 | 180 / 180 | 100% | 14.09 | 430 / 430 |
| prostate | 100% | 538.69 | 245 / 245 | 100% | 17.78 | 501 / 502 |
| stomach | 100% | 578.23 | 359 / 359 | 100% | 15.92 | 285 / 286 |
| breast | 100% | 598.66 | 459 / 459 | 100% | 17.80 | 1113 / 1118 |
| lung | 100% | 525.53 | 576 / 578 | 100% | 14.80 | 1153 / 1155 |
| intestine | 100% | 629.22 | 966 / 966 | 99% | 16.36 | 524 / 527 |
| skin | 100% | 446.81 | 1807 / 1809 | 99% | 16.11 | 469 / 472 |
| thymus | 100% | 623.42 | 653 / 653 | 99% | 19.29 | 600 / 605 |
| pancreas | 100% | 452.95 | 327 / 328 | 99% | 13.62 | 177 / 178 |
| kidney | 100% | 560.66 | 89 / 89 | 99% | 18.05 | 891 / 901 |
| uterus | 100% | 549.02 | 170 / 170 | 99% | 16.92 | 453 / 459 |
| bladder | 100% | 635.52 | 21 / 21 | 98% | 15.32 | 495 / 504 |
| brain | 98% | 258.25 | 2597 / 2642 | 100% | 15.49 | 704 / 705 |
| adrenal gland | 100% | 979.05 | 258 / 258 | 97% | 13.59 | 223 / 230 |
| liver | 100% | 364.61 | 225 / 226 | 95% | 10.08 | 387 / 406 |
| adipose | 100% | 584.26 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 100% | 14.94 | 80 / 80 |
| lymph node | 0% | 0 | 0 / 0 | 100% | 30.34 | 29 / 29 |
| spleen | 100% | 694.26 | 241 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 16.21 | 45 / 45 |
| ureter | 0% | 0 | 0 / 0 | 100% | 4.31 | 1 / 1 |
| blood vessel | 100% | 604.92 | 1334 / 1335 | 0% | 0 | 0 / 0 |
| muscle | 100% | 579.25 | 801 / 803 | 0% | 0 | 0 / 0 |
| heart | 98% | 687.48 | 848 / 861 | 0% | 0 | 0 / 0 |
| peripheral blood | 98% | 572.22 | 910 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0001558 | Biological process | regulation of cell growth |
| GO_0051642 | Biological process | centrosome localization |
| GO_0030030 | Biological process | cell projection organization |
| GO_0072697 | Biological process | protein localization to cell cortex |
| GO_0016226 | Biological process | iron-sulfur cluster assembly |
| GO_0006879 | Biological process | intracellular iron ion homeostasis |
| GO_0010826 | Biological process | negative regulation of centrosome duplication |
| GO_0005886 | Cellular component | plasma membrane |
| GO_0005813 | Cellular component | centrosome |
| GO_0005814 | Cellular component | centriole |
| GO_0005929 | Cellular component | cilium |
| GO_0005829 | Cellular component | cytosol |
| GO_0005634 | Cellular component | nucleus |
| GO_0140663 | Molecular function | ATP-dependent FeS chaperone activity |
| GO_0051536 | Molecular function | iron-sulfur cluster binding |
| GO_0000166 | Molecular function | nucleotide binding |
| GO_0046872 | Molecular function | metal ion binding |
| GO_0005524 | Molecular function | ATP binding |
| GO_0005515 | Molecular function | protein binding |
| GO_0051539 | Molecular function | 4 iron, 4 sulfur cluster binding |
| GO_0016887 | Molecular function | ATP hydrolysis activity |
| Gene name | NUBP1 |
| Protein name | C447E6.1 (Nucleotide binding protein 1 (E.coli MinD like) ) NUBP iron-sulfur cluster assembly factor 1, cytosolic Cytosolic Fe-S cluster assembly factor NUBP1 (Nucleotide-binding protein 1) (NBP 1) |
| Synonyms | NBP1 NBP |
| Description | FUNCTION: Component of the cytosolic iron-sulfur (Fe/S) protein assembly (CIA) machinery . Required for maturation of extramitochondrial Fe-S proteins . The NUBP1-NUBP2 heterotetramer forms a Fe-S scaffold complex, mediating the de novo assembly of an Fe-S cluster and its transfer to target apoproteins . Implicated in the regulation of centrosome duplication (By similarity). Negatively regulates cilium formation and structure (By similarity). . |
| Accessions | I3L518 Q2YS46 ENST00000571175.5 I3L531 I3L3A0 P53384 ENST00000574334.5 ENST00000283027.10 [P53384-1] ENST00000433392.6 [P53384-2] ENST00000574691.1 |
