NPTXR report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
glutamatergic neuron	9 studies	40% ± 16%	Explore
GABAergic neuron	8 studies	31% ± 14%	Explore
neuron	4 studies	26% ± 7%	Explore
interneuron	3 studies	52% ± 17%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	8 studies	30% ± 16%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	99%	16223.43	2615 / 2642	99%	117.06	701 / 705
prostate	96%	2194.89	236 / 245	100%	42.79	500 / 502
ovary	93%	1858.75	167 / 180	87%	24.97	376 / 430
adrenal gland	88%	1329.84	227 / 258	90%	23.33	206 / 230
uterus	99%	2973.59	169 / 170	47%	12.70	215 / 459
bladder	95%	2088.52	20 / 21	45%	14.11	229 / 504
thymus	45%	494.46	294 / 653	89%	29.52	536 / 605
pancreas	49%	557.99	160 / 328	84%	15.50	149 / 178
breast	52%	678.97	240 / 459	79%	19.97	879 / 1118
esophagus	62%	1459.41	894 / 1445	43%	10.84	79 / 183
ureter	0%	0	0 / 0	100%	6.08	1 / 1
blood vessel	99%	5021.27	1316 / 1335	0%	0	0 / 0
intestine	72%	1760.95	700 / 966	21%	3.70	109 / 527
heart	86%	2304.03	741 / 861	0%	0	0 / 0
stomach	60%	1005.75	214 / 359	26%	5.26	75 / 286
eye	0%	0	0 / 0	83%	12.82	66 / 80
lung	25%	252.56	144 / 578	48%	9.62	549 / 1155
kidney	15%	149.89	13 / 89	33%	5.24	295 / 901
skin	2%	18.57	35 / 1809	42%	14.08	198 / 472
spleen	38%	386.60	91 / 241	0%	0	0 / 0
adipose	36%	413.13	429 / 1204	0%	0	0 / 0
liver	5%	218.56	11 / 226	18%	3.79	73 / 406
tonsil	0%	0	0 / 0	20%	3.86	9 / 45
lymph node	0%	0	0 / 0	3%	0.23	1 / 29
peripheral blood	1%	14.60	13 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
muscle	0%	0	0 / 803	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0