NHLRC4 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
ciliated cell	5 studies	31% ± 8%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
adrenal gland	100%	471.31	258 / 258	98%	12.89	225 / 230
prostate	97%	133.77	238 / 245	79%	2.11	396 / 502
breast	95%	120.31	435 / 459	77%	6.42	862 / 1118
ovary	100%	262.91	180 / 180	53%	1.68	228 / 430
kidney	99%	524.75	88 / 89	52%	2.43	471 / 901
lung	95%	198.25	549 / 578	51%	1.47	584 / 1155
skin	72%	39.77	1311 / 1809	65%	2.14	307 / 472
thymus	75%	36.99	492 / 653	62%	2.74	375 / 605
bladder	95%	64.10	20 / 21	30%	0.53	150 / 504
uterus	99%	166.11	168 / 170	26%	1.03	118 / 459
intestine	97%	88.35	939 / 966	25%	0.46	131 / 527
brain	73%	69.39	1930 / 2642	27%	0.48	191 / 705
eye	0%	0	0 / 0	100%	8.39	80 / 80
spleen	100%	338.56	241 / 241	0%	0	0 / 0
stomach	81%	46.47	290 / 359	16%	0.24	47 / 286
lymph node	0%	0	0 / 0	97%	5.79	28 / 29
peripheral blood	93%	81.34	866 / 929	0%	0	0 / 0
adipose	91%	70.67	1101 / 1204	0%	0	0 / 0
esophagus	83%	61.82	1196 / 1445	4%	0.05	7 / 183
blood vessel	74%	42.63	984 / 1335	0%	0	0 / 0
heart	72%	36.38	620 / 861	0%	0	0 / 0
pancreas	17%	5.16	56 / 328	53%	0.98	95 / 178
liver	20%	7.22	45 / 226	8%	0.16	34 / 406
muscle	26%	8.16	211 / 803	0%	0	0 / 0
tonsil	0%	0	0 / 0	11%	0.17	5 / 45
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1