Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte precursor cell | 11 studies | 30% ± 10% | |
glutamatergic neuron | 9 studies | 56% ± 23% | |
GABAergic neuron | 8 studies | 46% ± 21% | |
interneuron | 6 studies | 41% ± 19% | |
retinal bipolar neuron | 5 studies | 58% ± 26% | |
neuron | 3 studies | 33% ± 11% | |
endothelial cell | 3 studies | 33% ± 12% | |
GABAergic interneuron | 3 studies | 39% ± 11% | |
OFF-bipolar cell | 3 studies | 65% ± 13% | |
ON-bipolar cell | 3 studies | 58% ± 19% | |
rod bipolar cell | 3 studies | 86% ± 11% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 79% | 707.94 | 2099 / 2642 | 80% | 5.77 | 563 / 705 |
spleen | 96% | 333.21 | 231 / 241 | 0% | 0 | 0 / 0 |
thymus | 49% | 68.33 | 319 / 653 | 19% | 1.00 | 117 / 605 |
breast | 50% | 97.03 | 229 / 459 | 13% | 0.33 | 143 / 1118 |
adipose | 54% | 106.00 | 646 / 1204 | 0% | 0 | 0 / 0 |
skin | 27% | 50.07 | 496 / 1809 | 4% | 0.30 | 19 / 472 |
peripheral blood | 23% | 122.54 | 214 / 929 | 0% | 0 | 0 / 0 |
heart | 23% | 23.92 | 197 / 861 | 0% | 0 | 0 / 0 |
lung | 1% | 1.03 | 7 / 578 | 17% | 0.40 | 196 / 1155 |
kidney | 6% | 4.87 | 5 / 89 | 6% | 0.12 | 55 / 901 |
stomach | 12% | 9.83 | 42 / 359 | 0% | 0 | 0 / 286 |
esophagus | 1% | 0.69 | 14 / 1445 | 10% | 0.29 | 19 / 183 |
pancreas | 3% | 2.48 | 9 / 328 | 8% | 0.22 | 15 / 178 |
intestine | 8% | 11.92 | 73 / 966 | 2% | 0.02 | 8 / 527 |
prostate | 0% | 0.40 | 1 / 245 | 7% | 0.83 | 34 / 502 |
lymph node | 0% | 0 | 0 / 0 | 7% | 0.21 | 2 / 29 |
tonsil | 0% | 0 | 0 / 0 | 7% | 0.14 | 3 / 45 |
ovary | 0% | 0 | 0 / 180 | 7% | 0.12 | 28 / 430 |
bladder | 0% | 0 | 0 / 21 | 5% | 0.14 | 26 / 504 |
blood vessel | 4% | 4.28 | 60 / 1335 | 0% | 0 | 0 / 0 |
adrenal gland | 0% | 0.22 | 1 / 258 | 4% | 0.20 | 9 / 230 |
uterus | 1% | 0.80 | 2 / 170 | 3% | 0.09 | 13 / 459 |
eye | 0% | 0 | 0 / 0 | 3% | 0.11 | 2 / 80 |
liver | 0% | 0 | 0 / 226 | 1% | 0.04 | 3 / 406 |
muscle | 0% | 0.21 | 1 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007613 | Biological process | memory |
GO_0140231 | Biological process | anterograde axonal transport of neurotransmitter receptor complex |
GO_2000312 | Biological process | regulation of kainate selective glutamate receptor activity |
GO_0048169 | Biological process | regulation of long-term neuronal synaptic plasticity |
GO_0099645 | Biological process | neurotransmitter receptor localization to postsynaptic specialization membrane |
GO_0008542 | Biological process | visual learning |
GO_2000463 | Biological process | positive regulation of excitatory postsynaptic potential |
GO_0098978 | Cellular component | glutamatergic synapse |
GO_0060076 | Cellular component | excitatory synapse |
GO_0098839 | Cellular component | postsynaptic density membrane |
GO_0005576 | Cellular component | extracellular region |
GO_0098685 | Cellular component | Schaffer collateral - CA1 synapse |
GO_0014069 | Cellular component | postsynaptic density |
GO_1904115 | Cellular component | axon cytoplasm |
GO_0035255 | Molecular function | ionotropic glutamate receptor binding |
Gene name | NETO1 |
Protein name | Neuropilin and tolloid like 1 Neuropilin and tolloid-like protein 1 (Brain-specific transmembrane protein containing 2 CUB and 1 LDL-receptor class A domains protein 1) |
Synonyms | BTCL1 |
Description | FUNCTION: Involved in the development and/or maintenance of neuronal circuitry. Accessory subunit of the neuronal N-methyl-D-aspartate receptor (NMDAR) critical for maintaining the abundance of GRIN2A-containing NMDARs in the postsynaptic density. Regulates long-term NMDA receptor-dependent synaptic plasticity and cognition, at least in the context of spatial learning and memory (By similarity). . |
Accessions | ENST00000327305.11 [Q8TDF5-3] ENST00000579169.1 ENST00000397929.5 [Q8TDF5-1] ENST00000583169.5 [Q8TDF5-3] Q8TDF5 J3QRF5 |