I. Expression across cell types
Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| epithelial cell | 3 studies | 18% ± 4% | |
| ciliated cell | 3 studies | 20% ± 5% | |
| astrocyte | 3 studies | 18% ± 4% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| epithelial cell | 3 studies | 18% ± 4% | |
| ciliated cell | 3 studies | 20% ± 5% | |
| astrocyte | 3 studies | 18% ± 4% |
Insufficient scRNA-seq data for expression of NEDD1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| esophagus | 100% | 974.58 | 1445 / 1445 | 100% | 26.06 | 183 / 183 |
| ovary | 100% | 887.40 | 180 / 180 | 100% | 14.32 | 429 / 430 |
| breast | 100% | 1215.99 | 459 / 459 | 100% | 26.21 | 1115 / 1118 |
| lung | 100% | 905.26 | 577 / 578 | 100% | 23.79 | 1151 / 1155 |
| uterus | 100% | 1335.41 | 170 / 170 | 99% | 28.46 | 454 / 459 |
| stomach | 100% | 648.49 | 359 / 359 | 98% | 18.46 | 281 / 286 |
| bladder | 100% | 950.38 | 21 / 21 | 98% | 18.19 | 495 / 504 |
| thymus | 100% | 914.91 | 653 / 653 | 98% | 15.19 | 594 / 605 |
| intestine | 100% | 1032.83 | 966 / 966 | 98% | 17.42 | 515 / 527 |
| prostate | 100% | 928.92 | 245 / 245 | 98% | 15.62 | 490 / 502 |
| pancreas | 98% | 487.03 | 323 / 328 | 98% | 13.46 | 174 / 178 |
| kidney | 100% | 659.54 | 89 / 89 | 95% | 14.48 | 858 / 901 |
| skin | 100% | 1158.57 | 1809 / 1809 | 93% | 15.90 | 437 / 472 |
| adrenal gland | 99% | 620.19 | 255 / 258 | 87% | 7.70 | 199 / 230 |
| brain | 86% | 309.42 | 2275 / 2642 | 98% | 15.42 | 691 / 705 |
| liver | 84% | 248.00 | 190 / 226 | 62% | 5.39 | 253 / 406 |
| blood vessel | 100% | 992.11 | 1335 / 1335 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 100% | 18.57 | 29 / 29 |
| spleen | 100% | 1091.64 | 241 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 34.25 | 45 / 45 |
| ureter | 0% | 0 | 0 / 0 | 100% | 6.04 | 1 / 1 |
| adipose | 100% | 1113.16 | 1203 / 1204 | 0% | 0 | 0 / 0 |
| muscle | 100% | 1389.71 | 802 / 803 | 0% | 0 | 0 / 0 |
| heart | 98% | 582.61 | 847 / 861 | 0% | 0 | 0 / 0 |
| peripheral blood | 82% | 890.21 | 763 / 929 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 75% | 8.00 | 60 / 80 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0051301 | Biological process | cell division |
| GO_0000278 | Biological process | mitotic cell cycle |
| GO_0007020 | Biological process | microtubule nucleation |
| GO_0005814 | Cellular component | centriole |
| GO_0005813 | Cellular component | centrosome |
| GO_0036064 | Cellular component | ciliary basal body |
| GO_0000242 | Cellular component | pericentriolar material |
| GO_0005829 | Cellular component | cytosol |
| GO_0005654 | Cellular component | nucleoplasm |
| GO_0045177 | Cellular component | apical part of cell |
| GO_0000922 | Cellular component | spindle pole |
| GO_0001650 | Cellular component | fibrillar center |
| GO_0043015 | Molecular function | gamma-tubulin binding |
| GO_0005515 | Molecular function | protein binding |
| Gene name | NEDD1 |
| Protein name | NEDD1 protein Protein NEDD1 (Neural precursor cell expressed developmentally down-regulated protein 1) (NEDD-1) NEDD1 gamma-tubulin ring complex targeting factor |
| Synonyms | |
| Description | FUNCTION: Required for mitosis progression. Promotes the nucleation of microtubules from the spindle. . |
| Accessions | Q8NHV4 ENST00000557092.5 G3V4L2 G3V4I9 ENST00000266742.9 [Q8NHV4-1] ENST00000411739.6 [Q8NHV4-2] ENST00000557478.5 G3V2M9 G3V2V3 ENST00000554226.5 ENST00000429527.6 [Q8NHV4-1] ENST00000557644.5 [Q8NHV4-3] G3V2S2 ENST00000553609.5 ENST00000555806.5 Q05CT8 ENST00000457368.2 [Q8NHV4-2] |
