Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 9 studies | 30% ± 17% | |
neuron | 5 studies | 23% ± 8% | |
GABAergic neuron | 5 studies | 33% ± 15% | |
retinal ganglion cell | 4 studies | 43% ± 18% | |
astrocyte | 4 studies | 27% ± 8% | |
interneuron | 4 studies | 35% ± 21% | |
GABAergic interneuron | 3 studies | 19% ± 2% | |
ciliated cell | 3 studies | 20% ± 5% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 7 studies | 28% ± 16% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 98% | 38779.67 | 2596 / 2642 | 100% | 110.77 | 705 / 705 |
thymus | 93% | 5219.24 | 609 / 653 | 100% | 37.69 | 603 / 605 |
adrenal gland | 92% | 4486.03 | 237 / 258 | 98% | 61.09 | 225 / 230 |
uterus | 91% | 8618.55 | 155 / 170 | 96% | 41.07 | 442 / 459 |
prostate | 86% | 7880.06 | 211 / 245 | 98% | 31.96 | 494 / 502 |
bladder | 86% | 12813.48 | 18 / 21 | 93% | 25.98 | 467 / 504 |
esophagus | 82% | 10311.32 | 1190 / 1445 | 89% | 32.83 | 163 / 183 |
skin | 67% | 2828.90 | 1209 / 1809 | 97% | 44.76 | 457 / 472 |
intestine | 71% | 15106.81 | 689 / 966 | 87% | 18.63 | 460 / 527 |
kidney | 42% | 2171.62 | 37 / 89 | 81% | 18.86 | 728 / 901 |
ovary | 21% | 879.36 | 37 / 180 | 98% | 34.19 | 421 / 430 |
stomach | 37% | 3793.23 | 132 / 359 | 80% | 20.60 | 228 / 286 |
eye | 0% | 0 | 0 / 0 | 100% | 59.54 | 80 / 80 |
tonsil | 0% | 0 | 0 / 0 | 100% | 40.73 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 13.23 | 1 / 1 |
blood vessel | 97% | 9593.49 | 1295 / 1335 | 0% | 0 | 0 / 0 |
lung | 13% | 468.44 | 75 / 578 | 83% | 23.56 | 961 / 1155 |
pancreas | 0% | 11.09 | 1 / 328 | 92% | 22.20 | 163 / 178 |
breast | 3% | 96.50 | 12 / 459 | 89% | 18.98 | 992 / 1118 |
lymph node | 0% | 0 | 0 / 0 | 28% | 3.65 | 8 / 29 |
liver | 0% | 16.07 | 1 / 226 | 26% | 4.90 | 105 / 406 |
adipose | 10% | 440.64 | 119 / 1204 | 0% | 0 | 0 / 0 |
heart | 9% | 336.67 | 79 / 861 | 0% | 0 | 0 / 0 |
muscle | 0% | 8.81 | 2 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
GO_0010975 | Biological process | regulation of neuron projection development |
GO_0070588 | Biological process | calcium ion transmembrane transport |
GO_0043231 | Cellular component | intracellular membrane-bounded organelle |
GO_0030424 | Cellular component | axon |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0005886 | Cellular component | plasma membrane |
GO_0014069 | Cellular component | postsynaptic density |
GO_0048471 | Cellular component | perinuclear region of cytoplasm |
GO_0005737 | Cellular component | cytoplasm |
GO_0030425 | Cellular component | dendrite |
GO_0005245 | Molecular function | voltage-gated calcium channel activity |
GO_0005509 | Molecular function | calcium ion binding |
GO_0008048 | Molecular function | calcium sensitive guanylate cyclase activator activity |
GO_0005515 | Molecular function | protein binding |
Gene name | NCS1 |
Protein name | Neuronal calcium sensor 1 (NCS-1) (Frequenin homolog) (Frequenin-like protein) (Frequenin-like ubiquitous protein) |
Synonyms | FLUP FREQ |
Description | FUNCTION: Neuronal calcium sensor, regulator of G protein-coupled receptor phosphorylation in a calcium dependent manner. Directly regulates GRK1 (RHOK), but not GRK2 to GRK5. Can substitute for calmodulin (By similarity). Stimulates PI4KB kinase activity (By similarity). Involved in long-term synaptic plasticity through its interaction with PICK1 (By similarity). May also play a role in neuron differentiation through inhibition of the activity of N-type voltage-gated calcium channel (By similarity). . |
Accessions | ENST00000630865.1 [P62166-2] ENST00000372398.6 [P62166-1] P62166 |