Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 19 studies | 61% ± 21% | |
oligodendrocyte | 16 studies | 75% ± 20% | |
oligodendrocyte precursor cell | 14 studies | 70% ± 19% | |
microglial cell | 14 studies | 51% ± 15% | |
type I pneumocyte | 10 studies | 67% ± 23% | |
endothelial cell | 10 studies | 32% ± 17% | |
GABAergic neuron | 9 studies | 35% ± 14% | |
pericyte | 9 studies | 33% ± 16% | |
macrophage | 8 studies | 35% ± 14% | |
glutamatergic neuron | 7 studies | 30% ± 14% | |
interneuron | 6 studies | 36% ± 25% | |
Mueller cell | 6 studies | 61% ± 25% | |
smooth muscle cell | 6 studies | 24% ± 7% | |
retinal bipolar neuron | 5 studies | 48% ± 25% | |
neuron | 5 studies | 45% ± 17% | |
retinal cone cell | 5 studies | 51% ± 27% | |
cardiac muscle cell | 5 studies | 54% ± 13% | |
club cell | 5 studies | 31% ± 18% | |
fibroblast | 5 studies | 31% ± 12% | |
epithelial cell | 4 studies | 28% ± 14% | |
retina horizontal cell | 4 studies | 47% ± 15% | |
differentiation-committed oligodendrocyte precursor | 3 studies | 69% ± 7% | |
capillary endothelial cell | 3 studies | 28% ± 10% | |
GABAergic amacrine cell | 3 studies | 31% ± 17% | |
OFF-bipolar cell | 3 studies | 62% ± 23% | |
ON-bipolar cell | 3 studies | 50% ± 12% | |
glycinergic amacrine cell | 3 studies | 58% ± 12% | |
rod bipolar cell | 3 studies | 62% ± 26% | |
abnormal cell | 3 studies | 24% ± 7% | |
hepatocyte | 3 studies | 65% ± 17% | |
retinal pigment epithelial cell | 3 studies | 56% ± 10% | |
ependymal cell | 3 studies | 52% ± 22% | |
myeloid cell | 3 studies | 34% ± 12% | |
ciliated cell | 3 studies | 19% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 99% | 401.99 | 2607 / 2642 | 98% | 6.31 | 691 / 705 |
breast | 99% | 476.43 | 456 / 459 | 91% | 5.39 | 1020 / 1118 |
kidney | 99% | 321.15 | 88 / 89 | 75% | 2.37 | 678 / 901 |
lung | 100% | 1526.95 | 578 / 578 | 52% | 1.80 | 605 / 1155 |
skin | 83% | 290.13 | 1495 / 1809 | 61% | 3.00 | 290 / 472 |
esophagus | 71% | 296.48 | 1021 / 1445 | 70% | 2.67 | 128 / 183 |
prostate | 73% | 96.27 | 179 / 245 | 65% | 1.67 | 328 / 502 |
ovary | 91% | 271.18 | 164 / 180 | 33% | 0.64 | 142 / 430 |
liver | 92% | 181.42 | 208 / 226 | 27% | 0.59 | 108 / 406 |
thymus | 98% | 275.67 | 642 / 653 | 12% | 0.23 | 72 / 605 |
adrenal gland | 43% | 51.86 | 111 / 258 | 63% | 2.94 | 145 / 230 |
stomach | 73% | 108.48 | 262 / 359 | 33% | 0.84 | 94 / 286 |
intestine | 65% | 121.37 | 632 / 966 | 32% | 0.76 | 169 / 527 |
uterus | 52% | 62.06 | 89 / 170 | 44% | 1.13 | 201 / 459 |
adipose | 96% | 336.43 | 1155 / 1204 | 0% | 0 | 0 / 0 |
spleen | 90% | 127.37 | 216 / 241 | 0% | 0 | 0 / 0 |
heart | 89% | 234.92 | 769 / 861 | 0% | 0 | 0 / 0 |
bladder | 52% | 52.05 | 11 / 21 | 29% | 0.87 | 148 / 504 |
tonsil | 0% | 0 | 0 / 0 | 73% | 2.28 | 33 / 45 |
blood vessel | 57% | 80.54 | 755 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 48% | 2.01 | 38 / 80 |
pancreas | 9% | 9.01 | 31 / 328 | 22% | 0.37 | 40 / 178 |
lymph node | 0% | 0 | 0 / 0 | 17% | 0.32 | 5 / 29 |
peripheral blood | 10% | 29.27 | 95 / 929 | 0% | 0 | 0 / 0 |
muscle | 6% | 5.48 | 50 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007019 | Biological process | microtubule depolymerization |
GO_0008150 | Biological process | biological_process |
GO_0001578 | Biological process | microtubule bundle formation |
GO_0005575 | Cellular component | cellular_component |
GO_0035371 | Cellular component | microtubule plus-end |
Gene name | NCKAP5 |
Protein name | Nck-associated protein 5 (NAP-5) (Peripheral clock protein) NCK associated protein 5 |
Synonyms | ERIH NAP5 |
Description | |
Accessions | ENST00000640590.1 O14513 A0A1W2PNT1 C9JYL7 ENST00000427594.5 H7C187 A0A1W2PS86 ENST00000409261.6 [O14513-1] ENST00000358991.4 ENST00000639875.1 ENST00000409213.5 [O14513-2] |