Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 5 studies | 29% ± 10% | |
macrophage | 5 studies | 27% ± 10% | |
fibroblast | 5 studies | 19% ± 3% | |
endothelial cell | 4 studies | 35% ± 14% | |
interneuron | 4 studies | 36% ± 21% | |
neuron | 4 studies | 35% ± 9% | |
epithelial cell | 4 studies | 23% ± 12% | |
goblet cell | 4 studies | 19% ± 2% | |
GABAergic neuron | 4 studies | 32% ± 17% | |
oligodendrocyte | 4 studies | 31% ± 6% | |
granule cell | 3 studies | 20% ± 4% | |
microglial cell | 3 studies | 33% ± 6% | |
oligodendrocyte precursor cell | 3 studies | 39% ± 11% | |
progenitor cell | 3 studies | 23% ± 11% | |
myofibroblast cell | 3 studies | 22% ± 2% | |
glutamatergic neuron | 3 studies | 39% ± 17% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 5 studies | 33% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 1672.25 | 2636 / 2642 | 100% | 8.12 | 703 / 705 |
ovary | 100% | 2208.41 | 180 / 180 | 99% | 4.82 | 425 / 430 |
esophagus | 99% | 1048.47 | 1427 / 1445 | 99% | 5.03 | 182 / 183 |
prostate | 100% | 1470.37 | 244 / 245 | 98% | 5.92 | 494 / 502 |
intestine | 100% | 1752.99 | 965 / 966 | 98% | 3.51 | 516 / 527 |
breast | 99% | 1092.76 | 454 / 459 | 98% | 6.63 | 1098 / 1118 |
bladder | 100% | 1654.29 | 21 / 21 | 97% | 3.71 | 488 / 504 |
thymus | 99% | 1163.16 | 649 / 653 | 97% | 4.20 | 586 / 605 |
stomach | 98% | 936.41 | 353 / 359 | 98% | 4.49 | 279 / 286 |
skin | 98% | 943.38 | 1770 / 1809 | 97% | 4.45 | 457 / 472 |
uterus | 100% | 1865.71 | 170 / 170 | 94% | 4.34 | 431 / 459 |
lung | 96% | 820.79 | 553 / 578 | 98% | 3.98 | 1130 / 1155 |
kidney | 100% | 1090.45 | 89 / 89 | 93% | 3.71 | 842 / 901 |
pancreas | 95% | 590.53 | 313 / 328 | 95% | 3.48 | 169 / 178 |
adrenal gland | 100% | 4243.64 | 258 / 258 | 86% | 4.26 | 197 / 230 |
liver | 98% | 743.88 | 222 / 226 | 75% | 1.89 | 303 / 406 |
spleen | 100% | 861.17 | 240 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 99% | 1280.99 | 1325 / 1335 | 0% | 0 | 0 / 0 |
adipose | 99% | 943.00 | 1188 / 1204 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 93% | 2.53 | 42 / 45 |
heart | 89% | 597.31 | 770 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 81% | 2.17 | 65 / 80 |
lymph node | 0% | 0 | 0 / 0 | 76% | 1.71 | 22 / 29 |
muscle | 75% | 400.37 | 601 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 18% | 65.55 | 169 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0005737 | Cellular component | cytoplasm |
GO_0005515 | Molecular function | protein binding |
Gene name | NBPF1 |
Protein name | Neuroblastoma breakpoint family member 1 NBPF1 protein NBPF member 1 |
Synonyms | KIAA1693 |
Description | |
Accessions | ENST00000430580.6 [Q3BBV0-2] S4R2Z6 Q3BBV0 Q4VC10 ENST00000392963.5 |