Name | Number of supported studies | Average coverage | |
---|---|---|---|
plasmacytoid dendritic cell | 12 studies | 30% ± 7% | |
GABAergic neuron | 7 studies | 34% ± 14% | |
interneuron | 6 studies | 36% ± 19% | |
endothelial cell | 5 studies | 24% ± 15% | |
macrophage | 5 studies | 20% ± 6% | |
oligodendrocyte precursor cell | 5 studies | 28% ± 8% | |
epithelial cell | 5 studies | 29% ± 8% | |
CD4-positive, alpha-beta T cell | 4 studies | 19% ± 3% | |
microglial cell | 4 studies | 21% ± 4% | |
neuron | 4 studies | 28% ± 8% | |
retina horizontal cell | 4 studies | 21% ± 4% | |
glutamatergic neuron | 4 studies | 41% ± 11% | |
dendritic cell | 4 studies | 27% ± 8% | |
hematopoietic precursor cell | 3 studies | 30% ± 11% | |
GABAergic interneuron | 3 studies | 23% ± 7% | |
myeloid cell | 3 studies | 20% ± 5% | |
ciliated cell | 3 studies | 20% ± 1% | |
lymphocyte | 3 studies | 19% ± 4% | |
goblet cell | 3 studies | 32% ± 13% | |
astrocyte | 3 studies | 29% ± 11% | |
hepatocyte | 3 studies | 35% ± 11% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 6 studies | 27% ± 10% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 566.93 | 1444 / 1445 | 99% | 8.56 | 182 / 183 |
lung | 100% | 817.75 | 576 / 578 | 97% | 6.96 | 1121 / 1155 |
prostate | 100% | 862.09 | 245 / 245 | 96% | 8.36 | 480 / 502 |
breast | 100% | 844.41 | 459 / 459 | 94% | 8.34 | 1054 / 1118 |
thymus | 100% | 1283.13 | 653 / 653 | 92% | 6.68 | 559 / 605 |
uterus | 100% | 984.98 | 170 / 170 | 89% | 5.78 | 410 / 459 |
pancreas | 100% | 1437.59 | 328 / 328 | 88% | 4.27 | 156 / 178 |
stomach | 100% | 509.66 | 358 / 359 | 84% | 4.65 | 239 / 286 |
ovary | 100% | 1171.89 | 180 / 180 | 83% | 3.85 | 358 / 430 |
bladder | 100% | 784.14 | 21 / 21 | 79% | 4.26 | 400 / 504 |
intestine | 100% | 631.92 | 966 / 966 | 77% | 3.88 | 406 / 527 |
brain | 82% | 234.87 | 2177 / 2642 | 94% | 5.72 | 663 / 705 |
skin | 100% | 1016.26 | 1807 / 1809 | 75% | 4.82 | 352 / 472 |
kidney | 99% | 397.02 | 88 / 89 | 75% | 3.49 | 677 / 901 |
liver | 100% | 921.67 | 226 / 226 | 73% | 3.56 | 297 / 406 |
adrenal gland | 99% | 441.47 | 256 / 258 | 62% | 2.58 | 143 / 230 |
spleen | 100% | 544.66 | 241 / 241 | 0% | 0 | 0 / 0 |
adipose | 100% | 610.91 | 1202 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 566.10 | 1332 / 1335 | 0% | 0 | 0 / 0 |
heart | 91% | 315.36 | 786 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 90% | 6.47 | 26 / 29 |
tonsil | 0% | 0 | 0 / 0 | 89% | 6.12 | 40 / 45 |
muscle | 80% | 219.53 | 642 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 62% | 545.17 | 580 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 30% | 1.14 | 24 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0006259 | Biological process | DNA metabolic process |
GO_0005829 | Cellular component | cytosol |
GO_0046404 | Molecular function | ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity |
GO_0005515 | Molecular function | protein binding |
GO_0004519 | Molecular function | endonuclease activity |
GO_0043130 | Molecular function | ubiquitin binding |
GO_0004520 | Molecular function | DNA endonuclease activity |
GO_0005524 | Molecular function | ATP binding |
Gene name | N4BP2 |
Protein name | NEDD4 binding protein 2 Alternative protein N4BP2 NEDD4-binding protein 2 (N4BP2) (EC 3.-.-.-) (BCL-3-binding protein) Nedd4 binding protein 2 |
Synonyms | B3BP KIAA1413 |
Description | FUNCTION: Has 5'-polynucleotide kinase and nicking endonuclease activity. May play a role in DNA repair or recombination. . |
Accessions | D6RC09 Q86UW6 ENST00000511480.5 ENST00000261435.11 [Q86UW6-1] H0YA93 L8E8U9 ENST00000515550.1 B2ZZ87 D6R9J2 ENST00000706658.1 ENST00000513269.1 |