Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 5 studies | 25% ± 7% | |
Mueller cell | 4 studies | 34% ± 10% | |
oligodendrocyte precursor cell | 4 studies | 27% ± 8% | |
oligodendrocyte | 4 studies | 21% ± 6% | |
GABAergic neuron | 3 studies | 28% ± 10% | |
glutamatergic neuron | 3 studies | 35% ± 11% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 27% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 1585.58 | 2642 / 2642 | 100% | 25.91 | 704 / 705 |
thymus | 100% | 1054.75 | 652 / 653 | 99% | 11.88 | 597 / 605 |
pancreas | 100% | 593.84 | 327 / 328 | 98% | 9.83 | 175 / 178 |
ovary | 100% | 978.91 | 180 / 180 | 97% | 10.17 | 419 / 430 |
lung | 99% | 909.89 | 574 / 578 | 98% | 12.96 | 1132 / 1155 |
kidney | 100% | 756.94 | 89 / 89 | 97% | 11.37 | 870 / 901 |
adrenal gland | 100% | 1171.94 | 258 / 258 | 96% | 16.53 | 221 / 230 |
esophagus | 100% | 1144.39 | 1439 / 1445 | 96% | 8.80 | 176 / 183 |
breast | 100% | 879.23 | 459 / 459 | 94% | 9.72 | 1053 / 1118 |
intestine | 100% | 1074.55 | 964 / 966 | 94% | 8.25 | 495 / 527 |
prostate | 100% | 1074.88 | 245 / 245 | 93% | 8.12 | 468 / 502 |
bladder | 100% | 1208.14 | 21 / 21 | 93% | 8.42 | 468 / 504 |
stomach | 99% | 736.12 | 354 / 359 | 93% | 8.35 | 265 / 286 |
skin | 99% | 1010.47 | 1793 / 1809 | 92% | 14.99 | 432 / 472 |
uterus | 100% | 1324.90 | 170 / 170 | 86% | 8.79 | 397 / 459 |
liver | 93% | 413.08 | 210 / 226 | 50% | 3.53 | 201 / 406 |
adipose | 100% | 892.45 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1019.65 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 12.67 | 29 / 29 |
spleen | 100% | 1020.21 | 241 / 241 | 0% | 0 | 0 / 0 |
muscle | 100% | 1110.98 | 799 / 803 | 0% | 0 | 0 / 0 |
heart | 98% | 958.20 | 845 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 87% | 6.44 | 39 / 45 |
eye | 0% | 0 | 0 / 0 | 71% | 5.68 | 57 / 80 |
peripheral blood | 36% | 508.10 | 334 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
Gene name | MSANTD4 |
Protein name | Myb/SANT-like DNA-binding domain-containing protein 4 Myb/SANT-like DNA-binding domain-containing protein 4 (Myb/SANT-like DNA-binding domain containing 4 with coiled-coils) |
Synonyms | KIAA1826 DC25 |
Description | |
Accessions | Q8NCY6 ENST00000301919.9 ENST00000534458.1 E9PRK0 E9PKC8 ENST00000530108.1 E9PLV2 ENST00000530788.1 |