Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 8 studies | 24% ± 8% | |
epithelial cell | 7 studies | 40% ± 12% | |
type I pneumocyte | 6 studies | 24% ± 8% | |
retinal cone cell | 6 studies | 35% ± 14% | |
ciliated cell | 6 studies | 27% ± 6% | |
basal cell | 5 studies | 31% ± 12% | |
B cell | 5 studies | 19% ± 4% | |
enterocyte | 5 studies | 17% ± 1% | |
retinal rod cell | 5 studies | 21% ± 4% | |
macrophage | 5 studies | 22% ± 4% | |
club cell | 5 studies | 31% ± 14% | |
hematopoietic precursor cell | 4 studies | 25% ± 7% | |
plasmablast | 4 studies | 39% ± 16% | |
erythroblast | 4 studies | 30% ± 10% | |
retina horizontal cell | 4 studies | 22% ± 4% | |
adipocyte | 4 studies | 19% ± 3% | |
cardiac muscle cell | 4 studies | 30% ± 7% | |
GABAergic neuron | 4 studies | 43% ± 18% | |
astrocyte | 4 studies | 34% ± 12% | |
glutamatergic neuron | 4 studies | 48% ± 19% | |
transit amplifying cell | 4 studies | 28% ± 11% | |
plasmacytoid dendritic cell | 4 studies | 22% ± 7% | |
memory B cell | 4 studies | 16% ± 1% | |
secretory cell | 3 studies | 25% ± 11% | |
conventional dendritic cell | 3 studies | 34% ± 16% | |
non-classical monocyte | 3 studies | 22% ± 3% | |
kidney loop of Henle epithelial cell | 3 studies | 20% ± 3% | |
epithelial cell of proximal tubule | 3 studies | 17% ± 1% | |
microglial cell | 3 studies | 19% ± 2% | |
amacrine cell | 3 studies | 28% ± 9% | |
fibroblast | 3 studies | 25% ± 5% | |
oligodendrocyte precursor cell | 3 studies | 36% ± 7% | |
CD4-positive, alpha-beta T cell | 3 studies | 20% ± 4% | |
dendritic cell | 3 studies | 35% ± 6% | |
abnormal cell | 3 studies | 25% ± 4% | |
goblet cell | 3 studies | 22% ± 4% | |
interneuron | 3 studies | 45% ± 23% | |
neuron | 3 studies | 29% ± 7% | |
oligodendrocyte | 3 studies | 21% ± 2% | |
natural killer cell | 3 studies | 18% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
bladder | 100% | 4466.10 | 21 / 21 | 100% | 26.84 | 504 / 504 |
liver | 100% | 3485.02 | 226 / 226 | 100% | 18.63 | 406 / 406 |
prostate | 100% | 4397.46 | 245 / 245 | 100% | 19.10 | 502 / 502 |
skin | 100% | 3267.70 | 1809 / 1809 | 100% | 32.89 | 472 / 472 |
stomach | 100% | 3279.98 | 359 / 359 | 100% | 21.25 | 286 / 286 |
thymus | 100% | 8911.62 | 653 / 653 | 100% | 34.50 | 605 / 605 |
uterus | 100% | 4062.15 | 170 / 170 | 100% | 21.37 | 459 / 459 |
intestine | 100% | 5499.74 | 966 / 966 | 100% | 24.93 | 526 / 527 |
ovary | 100% | 4678.14 | 180 / 180 | 100% | 17.79 | 429 / 430 |
pancreas | 100% | 1876.84 | 327 / 328 | 100% | 16.22 | 178 / 178 |
lung | 100% | 4036.98 | 577 / 578 | 100% | 20.55 | 1153 / 1155 |
adrenal gland | 100% | 3596.34 | 258 / 258 | 100% | 20.78 | 229 / 230 |
breast | 100% | 3380.68 | 459 / 459 | 100% | 16.33 | 1113 / 1118 |
brain | 99% | 3772.61 | 2624 / 2642 | 100% | 24.47 | 705 / 705 |
esophagus | 100% | 4268.02 | 1445 / 1445 | 99% | 13.61 | 181 / 183 |
kidney | 100% | 4409.79 | 89 / 89 | 99% | 18.03 | 890 / 901 |
adipose | 100% | 3290.02 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 28.84 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 36.10 | 29 / 29 |
muscle | 100% | 4889.32 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 4771.78 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 18.57 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 17.90 | 1 / 1 |
blood vessel | 100% | 2337.64 | 1332 / 1335 | 0% | 0 | 0 / 0 |
heart | 98% | 4917.82 | 846 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 56% | 1455.86 | 521 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0032543 | Biological process | mitochondrial translation |
GO_0005743 | Cellular component | mitochondrial inner membrane |
GO_0005763 | Cellular component | mitochondrial small ribosomal subunit |
GO_0005739 | Cellular component | mitochondrion |
GO_0003735 | Molecular function | structural constituent of ribosome |
Gene name | MRPS25 |
Protein name | Mitochondrial ribosomal protein S25 Small ribosomal subunit protein mS25 (28S ribosomal protein S25, mitochondrial) (MRP-S25) (S25mt) Small ribosomal subunit protein mS25 (28S ribosomal protein S25, mitochondrial) |
Synonyms | RPMS25 hCG_27828 |
Description | |
Accessions | ENST00000695379.1 [P82663-1] ENST00000695381.1 A0A8Q3WKJ5 ENST00000420267.6 ENST00000496484.3 [P82663-1] A0A8Q3WKH6 ENST00000444840.6 [P82663-3] ENST00000253686.7 [P82663-1] Q96Q22 ENST00000447299.3 A0A8Q3WLJ1 A0A8Q3SHU8 A0A8Q3SHT9 ENST00000695394.1 [P82663-1] ENST00000695378.1 ENST00000695390.1 ENST00000695386.1 [P82663-1] A0A8Q3WKE1 ENST00000698780.1 ENST00000695334.2 [P82663-1] E7EPW2 ENST00000695376.1 [P82663-1] ENST00000449354.7 [P82663-2] P82663 ENST00000695382.1 [P82663-1] ENST00000695377.1 ENST00000695393.1 ENST00000695392.1 [P82663-1] ENST00000698783.1 [P82663-1] ENST00000698781.1 ENST00000695396.1 ENST00000695391.1 [P82663-1] ENST00000474866.3 [P82663-1] ENST00000695375.1 ENST00000695323.1 ENST00000698782.1 [P82663-1] A0A8Q3WKE3 ENST00000695383.2 ENST00000695380.2 [P82663-1] ENST00000695387.1 [P82663-1] ENST00000695385.1 |