MIGA2 report

Query

Invalid input gene. Please select from the suggestions.

I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
GABAergic neuron	3 studies	29% ± 9%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	3 studies	22% ± 8%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	3730.06	1445 / 1445	100%	14.91	183 / 183
thymus	100%	4542.60	653 / 653	100%	21.75	605 / 605
uterus	100%	3033.71	170 / 170	100%	17.89	459 / 459
intestine	100%	4409.11	966 / 966	100%	15.49	525 / 527
prostate	100%	4663.08	245 / 245	100%	17.45	500 / 502
adrenal gland	100%	4307.80	258 / 258	100%	18.22	229 / 230
bladder	100%	3764.29	21 / 21	99%	17.21	501 / 504
brain	99%	2960.25	2626 / 2642	100%	18.92	705 / 705
ovary	100%	2917.88	180 / 180	99%	11.56	427 / 430
stomach	100%	3299.94	359 / 359	99%	13.92	284 / 286
lung	100%	2576.66	577 / 578	99%	11.83	1145 / 1155
skin	100%	3145.24	1809 / 1809	99%	11.36	466 / 472
liver	100%	1729.57	226 / 226	99%	8.79	400 / 406
breast	100%	2442.15	459 / 459	98%	12.10	1101 / 1118
pancreas	98%	1273.36	323 / 328	99%	15.07	176 / 178
kidney	100%	3148.65	89 / 89	97%	9.98	877 / 901
lymph node	0%	0	0 / 0	100%	17.27	29 / 29
spleen	100%	3880.01	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	17.08	45 / 45
ureter	0%	0	0 / 0	100%	10.25	1 / 1
adipose	100%	2266.62	1203 / 1204	0%	0	0 / 0
blood vessel	100%	2040.55	1333 / 1335	0%	0	0 / 0
heart	100%	3191.30	859 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	99%	9.46	79 / 80
muscle	99%	1587.53	792 / 803	0%	0	0 / 0
peripheral blood	98%	2060.31	909 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0