Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 6 studies | 24% ± 6% | |
dendritic cell | 4 studies | 28% ± 6% | |
astrocyte | 3 studies | 17% ± 1% | |
plasmacytoid dendritic cell | 3 studies | 21% ± 5% |
Insufficient scRNA-seq data for expression of METTL17 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
bladder | 100% | 3177.05 | 21 / 21 | 100% | 17.89 | 504 / 504 |
esophagus | 100% | 3025.17 | 1445 / 1445 | 100% | 12.36 | 183 / 183 |
lung | 100% | 3089.26 | 578 / 578 | 100% | 16.59 | 1155 / 1155 |
skin | 100% | 3280.66 | 1809 / 1809 | 100% | 17.35 | 472 / 472 |
ovary | 100% | 3704.55 | 180 / 180 | 100% | 17.24 | 429 / 430 |
breast | 100% | 3468.37 | 459 / 459 | 100% | 15.05 | 1114 / 1118 |
pancreas | 100% | 2265.35 | 328 / 328 | 99% | 16.61 | 177 / 178 |
stomach | 100% | 2704.06 | 359 / 359 | 99% | 13.88 | 284 / 286 |
intestine | 100% | 3940.47 | 966 / 966 | 99% | 17.43 | 523 / 527 |
kidney | 100% | 3219.65 | 89 / 89 | 99% | 15.05 | 893 / 901 |
prostate | 100% | 3564.39 | 245 / 245 | 99% | 11.66 | 497 / 502 |
uterus | 100% | 4076.48 | 170 / 170 | 99% | 21.05 | 454 / 459 |
thymus | 100% | 4249.09 | 653 / 653 | 99% | 15.86 | 598 / 605 |
adrenal gland | 100% | 5150.76 | 258 / 258 | 98% | 15.44 | 226 / 230 |
liver | 100% | 2372.07 | 226 / 226 | 97% | 11.20 | 393 / 406 |
brain | 95% | 1634.71 | 2501 / 2642 | 100% | 16.27 | 705 / 705 |
adipose | 100% | 2873.76 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 20.23 | 29 / 29 |
spleen | 100% | 5009.83 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 17.51 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 8.07 | 1 / 1 |
blood vessel | 100% | 2687.36 | 1334 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 1717.67 | 800 / 803 | 0% | 0 | 0 / 0 |
heart | 99% | 1913.20 | 850 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 96% | 11.48 | 77 / 80 |
peripheral blood | 78% | 1432.19 | 725 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006412 | Biological process | translation |
GO_0180026 | Biological process | mitochondrial small ribosomal subunit assembly |
GO_0042274 | Biological process | ribosomal small subunit biogenesis |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005759 | Cellular component | mitochondrial matrix |
GO_1904047 | Molecular function | S-adenosyl-L-methionine binding |
GO_0005515 | Molecular function | protein binding |
GO_0051539 | Molecular function | 4 iron, 4 sulfur cluster binding |
GO_0046872 | Molecular function | metal ion binding |
GO_0008168 | Molecular function | methyltransferase activity |
Gene name | METTL17 |
Protein name | Methyltransferase like 17 (cDNA FLJ55011, highly similar to Homo sapiens methyltransferase 11 domain containing 1 isoform 3) (cDNA, FLJ78898, highly similar to Homo sapiens methyltransferase 11 domain containing 1 isoform 3) Methyltransferase like 17 Methyltransferase like 17 isoform 1 Methyltransferase-like protein 17, mitochondrial (EC 2.1.1.-) (False p73 target gene protein) (Methyltransferase 11 domain-containing protein 1) (Protein RSM22 homolog, mitochondrial) Methyltransferase like 17 isoform 4 |
Synonyms | METT11D1 |
Description | FUNCTION: Probable S-adenosyl-L-methionine-dependent RNA methyltransferase required to stabilize the mitochondrial small ribosomal subunit (mt-SSU). Required for protein translation in mitochondria. . |
Accessions | ENST00000339374.11 [Q9H7H0-1] ENST00000555533.6 G3V4P2 G3V3X6 B4E298 A0A0S2Z5L8 ENST00000553564.5 Q9H7H0 ENST00000555670.1 ENST00000555640.6 A0A0S2Z5V5 ENST00000557550.6 ENST00000554283.1 G3V353 G3V4H5 ENST00000556733.1 H0YJW1 ENST00000382985.8 [Q9H7H0-3] ENST00000556670.6 [Q9H7H0-2] ENST00000554751.5 |