Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte precursor cell | 12 studies | 83% ± 15% | |
GABAergic neuron | 9 studies | 74% ± 21% | |
oligodendrocyte | 9 studies | 40% ± 17% | |
glutamatergic neuron | 9 studies | 83% ± 15% | |
astrocyte | 7 studies | 34% ± 21% | |
microglial cell | 6 studies | 40% ± 22% | |
interneuron | 5 studies | 72% ± 27% | |
neuron | 4 studies | 52% ± 16% | |
endothelial cell | 4 studies | 45% ± 19% | |
retinal bipolar neuron | 4 studies | 57% ± 36% | |
OFF-bipolar cell | 4 studies | 67% ± 31% | |
amacrine cell | 4 studies | 71% ± 24% | |
retinal ganglion cell | 4 studies | 84% ± 10% | |
differentiation-committed oligodendrocyte precursor | 3 studies | 74% ± 3% | |
granule cell | 3 studies | 46% ± 25% | |
GABAergic amacrine cell | 3 studies | 83% ± 11% | |
ON-bipolar cell | 3 studies | 85% ± 10% | |
glycinergic amacrine cell | 3 studies | 79% ± 10% | |
rod bipolar cell | 3 studies | 74% ± 36% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 98% | 204.47 | 2601 / 2642 | 76% | 4.60 | 534 / 705 |
skin | 9% | 3.18 | 168 / 1809 | 56% | 2.32 | 264 / 472 |
eye | 0% | 0 | 0 / 0 | 59% | 2.15 | 47 / 80 |
adrenal gland | 2% | 0.94 | 6 / 258 | 28% | 0.72 | 64 / 230 |
liver | 3% | 1.15 | 6 / 226 | 9% | 0.17 | 36 / 406 |
intestine | 7% | 2.89 | 72 / 966 | 1% | 0.01 | 3 / 527 |
bladder | 5% | 1.24 | 1 / 21 | 2% | 0.03 | 9 / 504 |
esophagus | 1% | 0.47 | 19 / 1445 | 5% | 0.16 | 9 / 183 |
ovary | 4% | 2.44 | 8 / 180 | 0% | 0.01 | 2 / 430 |
stomach | 3% | 1.03 | 10 / 359 | 2% | 0.03 | 6 / 286 |
breast | 1% | 1.19 | 6 / 459 | 3% | 0.06 | 36 / 1118 |
uterus | 2% | 1.09 | 4 / 170 | 2% | 0.03 | 8 / 459 |
lung | 1% | 0.48 | 5 / 578 | 3% | 0.08 | 34 / 1155 |
kidney | 1% | 0.33 | 1 / 89 | 2% | 0.06 | 20 / 901 |
thymus | 3% | 1.04 | 18 / 653 | 0% | 0 | 0 / 605 |
adipose | 3% | 0.94 | 31 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 1% | 0.38 | 15 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0.22 | 4 / 929 | 0% | 0 | 0 / 0 |
spleen | 0% | 0.16 | 1 / 241 | 0% | 0 | 0 / 0 |
prostate | 0% | 0.12 | 1 / 245 | 0% | 0 | 0 / 502 |
muscle | 0% | 0.09 | 2 / 803 | 0% | 0 | 0 / 0 |
heart | 0% | 0.07 | 2 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
pancreas | 0% | 0 | 0 / 328 | 0% | 0 | 0 / 178 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0021522 | Biological process | spinal cord motor neuron differentiation |
GO_0007399 | Biological process | nervous system development |
GO_0098552 | Cellular component | side of membrane |
GO_0005576 | Cellular component | extracellular region |
GO_0005886 | Cellular component | plasma membrane |
Gene name | MDGA2 |
Protein name | MAM domain-containing glycosylphosphatidylinositol anchor protein 2 (MAM domain-containing protein 1) MAM domain containing glycosylphosphatidylinositol anchor 2 |
Synonyms | MAMDC1 UNQ8188/PRO23197 |
Description | FUNCTION: May be involved in cell-cell interactions. . |
Accessions | ENST00000399232.8 [Q7Z553-3] ENST00000557238.5 ENST00000554762.5 ENST00000357362.7 [Q7Z553-2] H0YJ52 E9PMG9 G3V5U0 ENST00000486952.2 ENST00000482848.7 Q7Z553 G3V5Z1 |