MCEMP1 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
classical monocyte	17 studies	30% ± 10%	Explore
monocyte	8 studies	25% ± 8%	Explore
macrophage	8 studies	43% ± 22%	Explore
alveolar macrophage	5 studies	75% ± 11%	Explore
neutrophil	4 studies	27% ± 6%	Explore
myeloid cell	4 studies	37% ± 6%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
lung	4 studies	21% ± 3%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
lung	100%	2915.84	578 / 578	72%	7.06	826 / 1155
spleen	98%	3064.49	237 / 241	0%	0	0 / 0
pancreas	13%	22.67	44 / 328	74%	6.27	132 / 178
peripheral blood	81%	20082.19	755 / 929	0%	0	0 / 0
stomach	24%	57.82	85 / 359	38%	1.48	109 / 286
thymus	19%	19.61	121 / 653	41%	2.25	246 / 605
intestine	17%	28.66	167 / 966	42%	1.72	219 / 527
adipose	52%	154.54	622 / 1204	0%	0	0 / 0
liver	42%	70.05	96 / 226	7%	0.19	27 / 406
bladder	14%	109.33	3 / 21	35%	1.94	175 / 504
kidney	28%	37.62	25 / 89	15%	0.44	137 / 901
breast	25%	27.75	116 / 459	12%	0.31	131 / 1118
esophagus	12%	21.24	180 / 1445	23%	0.80	43 / 183
uterus	14%	20.64	23 / 170	20%	0.52	92 / 459
heart	32%	47.14	275 / 861	0%	0	0 / 0
adrenal gland	29%	28.34	75 / 258	2%	0.18	5 / 230
blood vessel	21%	36.60	279 / 1335	0%	0	0 / 0
prostate	18%	35.02	43 / 245	2%	0.03	8 / 502
ovary	4%	7.25	8 / 180	12%	0.30	52 / 430
brain	8%	7.85	204 / 2642	9%	0.39	60 / 705
skin	2%	1.57	32 / 1809	12%	0.36	56 / 472
tonsil	0%	0	0 / 0	13%	0.52	6 / 45
lymph node	0%	0	0 / 0	10%	0.81	3 / 29
muscle	3%	2.97	26 / 803	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1