Name | Number of supported studies | Average coverage | |
---|---|---|---|
plasma cell | 6 studies | 23% ± 11% | |
macrophage | 5 studies | 24% ± 5% | |
plasmacytoid dendritic cell | 5 studies | 23% ± 4% | |
plasmablast | 4 studies | 39% ± 18% | |
endothelial cell | 4 studies | 19% ± 3% | |
epithelial cell | 4 studies | 25% ± 4% | |
astrocyte | 4 studies | 26% ± 6% | |
glutamatergic neuron | 4 studies | 43% ± 16% | |
GABAergic neuron | 3 studies | 42% ± 9% | |
dendritic cell | 3 studies | 26% ± 4% | |
oligodendrocyte precursor cell | 3 studies | 23% ± 3% | |
interneuron | 3 studies | 34% ± 14% | |
neuron | 3 studies | 23% ± 5% | |
oligodendrocyte | 3 studies | 19% ± 2% | |
microglial cell | 3 studies | 26% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
lung | 100% | 7665.12 | 578 / 578 | 100% | 59.56 | 1155 / 1155 |
ovary | 100% | 3947.37 | 180 / 180 | 100% | 42.30 | 430 / 430 |
pancreas | 100% | 4714.19 | 328 / 328 | 100% | 41.90 | 178 / 178 |
stomach | 100% | 5688.96 | 359 / 359 | 100% | 48.62 | 286 / 286 |
uterus | 100% | 6190.02 | 170 / 170 | 100% | 56.05 | 459 / 459 |
skin | 100% | 6815.06 | 1808 / 1809 | 100% | 61.24 | 472 / 472 |
prostate | 100% | 6089.89 | 245 / 245 | 100% | 50.22 | 501 / 502 |
breast | 100% | 5319.12 | 459 / 459 | 100% | 51.06 | 1115 / 1118 |
thymus | 100% | 6881.86 | 653 / 653 | 100% | 38.71 | 603 / 605 |
intestine | 100% | 6528.65 | 966 / 966 | 100% | 54.94 | 525 / 527 |
esophagus | 100% | 6447.04 | 1445 / 1445 | 99% | 44.91 | 182 / 183 |
bladder | 100% | 6517.38 | 21 / 21 | 99% | 53.92 | 500 / 504 |
brain | 99% | 5752.21 | 2611 / 2642 | 100% | 68.37 | 705 / 705 |
kidney | 100% | 4461.66 | 89 / 89 | 99% | 29.59 | 888 / 901 |
liver | 100% | 3740.99 | 226 / 226 | 99% | 30.09 | 400 / 406 |
adrenal gland | 100% | 5926.56 | 258 / 258 | 98% | 50.30 | 226 / 230 |
adipose | 100% | 5119.92 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 58.70 | 29 / 29 |
spleen | 100% | 9129.32 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 58.92 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 15.61 | 1 / 1 |
blood vessel | 100% | 6002.81 | 1333 / 1335 | 0% | 0 | 0 / 0 |
muscle | 99% | 4297.54 | 798 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 27.96 | 79 / 80 |
peripheral blood | 98% | 6567.16 | 913 / 929 | 0% | 0 | 0 / 0 |
heart | 97% | 3923.13 | 836 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0036120 | Biological process | cellular response to platelet-derived growth factor stimulus |
GO_1901838 | Biological process | positive regulation of transcription of nucleolar large rRNA by RNA polymerase I |
GO_0006418 | Biological process | tRNA aminoacylation for protein translation |
GO_0009303 | Biological process | rRNA transcription |
GO_0006431 | Biological process | methionyl-tRNA aminoacylation |
GO_0071364 | Biological process | cellular response to epidermal growth factor stimulus |
GO_0005730 | Cellular component | nucleolus |
GO_0070062 | Cellular component | extracellular exosome |
GO_0017101 | Cellular component | aminoacyl-tRNA synthetase multienzyme complex |
GO_0005829 | Cellular component | cytosol |
GO_0016020 | Cellular component | membrane |
GO_0005737 | Cellular component | cytoplasm |
GO_0000049 | Molecular function | tRNA binding |
GO_0004825 | Molecular function | methionine-tRNA ligase activity |
GO_0005524 | Molecular function | ATP binding |
Gene name | MARS1 |
Protein name | Methionyl-tRNA synthetase Methionyl-tRNA synthetase 1 Methionine--tRNA ligase, cytoplasmic (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS) |
Synonyms | MARS |
Description | FUNCTION: Catalyzes the specific attachment of an amino acid to its cognate tRNA in a 2 step reaction: the amino acid (AA) is first activated by ATP to form AA-AMP and then transferred to the acceptor end of the tRNA . Plays a role in the synthesis of ribosomal RNA in the nucleolus . . |
Accessions | ENST00000551431.5 P56192 F8VS26 ENST00000552007.5 ENST00000262027.10 [P56192-1] H0YIC2 ENST00000549074.5 ENST00000552499.5 ENST00000545888.6 ENST00000547665.5 H0YI94 H0YI27 ENST00000547501.5 ENST00000630803.1 F5H2V6 ENST00000630571.2 F8W0M7 H0YHV5 ENST00000552914.5 ENST00000551172.1 F8VPL7 ENST00000628866.2 F8VZZ9 ENST00000551892.1 ENST00000537638.6 [P56192-2] F8W0S4 H0YHL6 ENST00000548944.1 H0YIP0 ENST00000552371.1 |