Name | Number of supported studies | Average coverage | |
---|---|---|---|
ciliated cell | 10 studies | 27% ± 7% | |
glutamatergic neuron | 10 studies | 40% ± 23% | |
retinal cone cell | 8 studies | 48% ± 20% | |
neuron | 7 studies | 35% ± 17% | |
interneuron | 6 studies | 31% ± 20% | |
astrocyte | 6 studies | 27% ± 6% | |
retinal bipolar neuron | 5 studies | 23% ± 4% | |
GABAergic neuron | 5 studies | 41% ± 16% | |
granule cell | 3 studies | 26% ± 8% | |
retina horizontal cell | 3 studies | 20% ± 5% | |
OFF-bipolar cell | 3 studies | 20% ± 2% | |
ON-bipolar cell | 3 studies | 27% ± 1% | |
rod bipolar cell | 3 studies | 30% ± 4% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 10 studies | 31% ± 16% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 6133.65 | 2641 / 2642 | 100% | 33.70 | 702 / 705 |
prostate | 99% | 2166.26 | 242 / 245 | 100% | 11.15 | 500 / 502 |
adrenal gland | 99% | 2001.34 | 256 / 258 | 91% | 44.22 | 209 / 230 |
thymus | 91% | 1026.38 | 591 / 653 | 86% | 5.34 | 521 / 605 |
ovary | 82% | 871.25 | 147 / 180 | 57% | 4.59 | 244 / 430 |
kidney | 92% | 1451.91 | 82 / 89 | 35% | 1.78 | 319 / 901 |
uterus | 98% | 1976.91 | 166 / 170 | 22% | 2.03 | 101 / 459 |
lung | 66% | 784.54 | 379 / 578 | 51% | 2.78 | 585 / 1155 |
blood vessel | 96% | 1751.66 | 1277 / 1335 | 0% | 0 | 0 / 0 |
bladder | 62% | 776.24 | 13 / 21 | 23% | 1.14 | 117 / 504 |
esophagus | 63% | 1752.95 | 910 / 1445 | 21% | 1.00 | 38 / 183 |
pancreas | 5% | 33.95 | 15 / 328 | 78% | 7.17 | 139 / 178 |
intestine | 68% | 1573.94 | 656 / 966 | 13% | 0.77 | 71 / 527 |
breast | 27% | 200.32 | 124 / 459 | 50% | 2.65 | 558 / 1118 |
stomach | 44% | 965.76 | 158 / 359 | 22% | 1.14 | 64 / 286 |
skin | 39% | 437.35 | 704 / 1809 | 17% | 0.94 | 78 / 472 |
heart | 49% | 425.46 | 422 / 861 | 0% | 0 | 0 / 0 |
adipose | 35% | 290.93 | 424 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 28% | 1.57 | 22 / 80 |
liver | 0% | 0 | 0 / 226 | 16% | 0.60 | 64 / 406 |
lymph node | 0% | 0 | 0 / 0 | 14% | 0.64 | 4 / 29 |
spleen | 5% | 35.93 | 11 / 241 | 0% | 0 | 0 / 0 |
muscle | 0% | 1.56 | 2 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 1.96 | 1 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0070507 | Biological process | regulation of microtubule cytoskeleton organization |
GO_0050772 | Biological process | positive regulation of axonogenesis |
GO_0032418 | Biological process | lysosome localization |
GO_0000226 | Biological process | microtubule cytoskeleton organization |
GO_0048813 | Biological process | dendrite morphogenesis |
GO_0030705 | Biological process | cytoskeleton-dependent intracellular transport |
GO_0030424 | Cellular component | axon |
GO_0005801 | Cellular component | cis-Golgi network |
GO_0005798 | Cellular component | Golgi-associated vesicle |
GO_0030658 | Cellular component | transport vesicle membrane |
GO_0005874 | Cellular component | microtubule |
GO_0048471 | Cellular component | perinuclear region of cytoplasm |
GO_0030425 | Cellular component | dendrite |
GO_0008017 | Molecular function | microtubule binding |
GO_0005516 | Molecular function | calmodulin binding |
GO_0005515 | Molecular function | protein binding |
Gene name | MAP6 |
Protein name | Microtubule-associated protein 6 (MAP-6) (Stable tubule-only polypeptide) (STOP) |
Synonyms | KIAA1878 |
Description | FUNCTION: Involved in microtubule stabilization in many cell types, including neuronal cells (By similarity). Specifically has microtubule cold stabilizing activity (By similarity). Involved in dendrite morphogenesis and maintenance by regulating lysosomal trafficking via its interaction with TMEM106B . Regulates KIF5A-mediated axonal cargo transport (By similarity). Regulates axonal growth during neuron polarization (By similarity). . |
Accessions | ENST00000304771.8 [Q96JE9-1] ENST00000434603.2 [Q96JE9-2] Q96JE9 ENST00000526740.3 [Q96JE9-3] |