Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte precursor cell | 7 studies | 26% ± 9% | |
astrocyte | 7 studies | 24% ± 9% | |
glutamatergic neuron | 7 studies | 36% ± 21% | |
naive thymus-derived CD8-positive, alpha-beta T cell | 6 studies | 28% ± 9% | |
neuron | 6 studies | 32% ± 16% | |
interneuron | 5 studies | 32% ± 18% | |
CD8-positive, alpha-beta T cell | 5 studies | 34% ± 16% | |
CD4-positive, alpha-beta T cell | 4 studies | 41% ± 13% | |
fibroblast | 4 studies | 20% ± 5% | |
GABAergic neuron | 4 studies | 39% ± 6% | |
amacrine cell | 3 studies | 29% ± 11% | |
GABAergic amacrine cell | 3 studies | 25% ± 5% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 8 studies | 28% ± 15% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 98% | 1583.62 | 2601 / 2642 | 99% | 56.36 | 701 / 705 |
adrenal gland | 100% | 3630.45 | 257 / 258 | 84% | 34.55 | 193 / 230 |
thymus | 90% | 732.24 | 586 / 653 | 78% | 15.95 | 473 / 605 |
lung | 87% | 713.65 | 503 / 578 | 9% | 0.80 | 106 / 1155 |
breast | 65% | 304.39 | 299 / 459 | 16% | 1.58 | 179 / 1118 |
adipose | 71% | 348.64 | 851 / 1204 | 0% | 0 | 0 / 0 |
ovary | 68% | 266.81 | 123 / 180 | 2% | 0.35 | 9 / 430 |
heart | 60% | 584.91 | 515 / 861 | 0% | 0 | 0 / 0 |
muscle | 50% | 422.40 | 399 / 803 | 0% | 0 | 0 / 0 |
blood vessel | 49% | 200.98 | 654 / 1335 | 0% | 0 | 0 / 0 |
prostate | 33% | 117.57 | 80 / 245 | 8% | 0.73 | 38 / 502 |
uterus | 11% | 30.30 | 19 / 170 | 15% | 4.00 | 69 / 459 |
bladder | 19% | 47.57 | 4 / 21 | 5% | 0.91 | 27 / 504 |
skin | 6% | 15.42 | 102 / 1809 | 14% | 1.56 | 68 / 472 |
intestine | 14% | 43.97 | 136 / 966 | 4% | 0.57 | 19 / 527 |
pancreas | 3% | 6.89 | 11 / 328 | 14% | 1.27 | 25 / 178 |
esophagus | 13% | 36.60 | 190 / 1445 | 4% | 0.45 | 7 / 183 |
liver | 14% | 36.40 | 32 / 226 | 1% | 0.06 | 5 / 406 |
stomach | 9% | 21.59 | 33 / 359 | 3% | 0.65 | 10 / 286 |
peripheral blood | 10% | 32.15 | 97 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 8% | 0.43 | 6 / 80 |
lymph node | 0% | 0 | 0 / 0 | 7% | 0.74 | 2 / 29 |
kidney | 2% | 4.65 | 2 / 89 | 2% | 0.28 | 22 / 901 |
spleen | 2% | 6.07 | 5 / 241 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0051965 | Biological process | positive regulation of synapse assembly |
GO_0031012 | Cellular component | extracellular matrix |
GO_0016020 | Cellular component | membrane |
GO_0005615 | Cellular component | extracellular space |
Gene name | LRRN3 |
Protein name | Leucine-rich repeat neuronal protein 3 (Neuronal leucine-rich repeat protein 3) (NLRR-3) Leucine rich repeat neuronal 3 |
Synonyms | Nbla10363 tcag7.22 hCG_1643830 UNQ194/PRO220 |
Description | |
Accessions | ENST00000422987.3 Q9H3W5 ENST00000308478.10 ENST00000451085.5 E7EW58 ENST00000421101.1 A4D0T1 |