Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte precursor cell | 15 studies | 53% ± 20% | |
astrocyte | 8 studies | 28% ± 8% | |
GABAergic neuron | 7 studies | 29% ± 11% | |
interneuron | 6 studies | 29% ± 12% | |
glutamatergic neuron | 6 studies | 40% ± 18% | |
endothelial cell | 3 studies | 34% ± 19% | |
granule cell | 3 studies | 36% ± 6% | |
neuron | 3 studies | 31% ± 11% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 9 studies | 27% ± 11% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 1438.14 | 2632 / 2642 | 99% | 76.80 | 699 / 705 |
prostate | 96% | 503.94 | 234 / 245 | 82% | 27.83 | 411 / 502 |
pancreas | 72% | 186.80 | 236 / 328 | 74% | 10.87 | 131 / 178 |
thymus | 70% | 386.77 | 455 / 653 | 69% | 8.01 | 420 / 605 |
ovary | 98% | 689.66 | 176 / 180 | 41% | 5.48 | 177 / 430 |
breast | 59% | 314.67 | 271 / 459 | 66% | 15.27 | 743 / 1118 |
uterus | 79% | 288.42 | 134 / 170 | 38% | 11.68 | 174 / 459 |
lung | 58% | 154.22 | 338 / 578 | 39% | 5.73 | 451 / 1155 |
muscle | 92% | 503.05 | 740 / 803 | 0% | 0 | 0 / 0 |
spleen | 83% | 221.87 | 199 / 241 | 0% | 0 | 0 / 0 |
stomach | 60% | 151.84 | 216 / 359 | 22% | 3.25 | 64 / 286 |
blood vessel | 70% | 320.23 | 933 / 1335 | 0% | 0 | 0 / 0 |
esophagus | 41% | 108.96 | 587 / 1445 | 23% | 2.80 | 42 / 183 |
skin | 56% | 154.15 | 1017 / 1809 | 4% | 0.47 | 21 / 472 |
peripheral blood | 50% | 204.54 | 465 / 929 | 0% | 0 | 0 / 0 |
bladder | 19% | 34.29 | 4 / 21 | 29% | 4.07 | 148 / 504 |
tonsil | 0% | 0 | 0 / 0 | 31% | 5.12 | 14 / 45 |
intestine | 15% | 34.16 | 148 / 966 | 15% | 1.82 | 80 / 527 |
adipose | 22% | 65.44 | 266 / 1204 | 0% | 0 | 0 / 0 |
kidney | 11% | 22.89 | 10 / 89 | 5% | 0.53 | 48 / 901 |
eye | 0% | 0 | 0 / 0 | 9% | 1.04 | 7 / 80 |
liver | 0% | 0.79 | 1 / 226 | 3% | 0.40 | 13 / 406 |
adrenal gland | 1% | 2.83 | 3 / 258 | 1% | 0.26 | 3 / 230 |
heart | 1% | 1.06 | 6 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0051965 | Biological process | positive regulation of synapse assembly |
GO_0005615 | Cellular component | extracellular space |
GO_0031012 | Cellular component | extracellular matrix |
GO_0016020 | Cellular component | membrane |
GO_0005515 | Molecular function | protein binding |
Gene name | LRRN1 |
Protein name | Leucine-rich repeat neuronal protein 1 (Neuronal leucine-rich repeat protein 1) (NLRR-1) |
Synonyms | Nbla10449 KIAA1497 UNQ693/PRO1338 |
Description | |
Accessions | ENST00000319331.4 Q6UXK5 |