Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 6 studies | 18% ± 3% | |
epithelial cell | 5 studies | 31% ± 13% | |
oligodendrocyte precursor cell | 5 studies | 28% ± 10% | |
fibroblast | 4 studies | 19% ± 2% | |
glutamatergic neuron | 4 studies | 41% ± 8% | |
oligodendrocyte | 4 studies | 23% ± 6% | |
B cell | 3 studies | 17% ± 1% | |
CD4-positive, alpha-beta T cell | 3 studies | 17% ± 0% | |
classical monocyte | 3 studies | 25% ± 5% | |
hematopoietic precursor cell | 3 studies | 27% ± 11% | |
GABAergic neuron | 3 studies | 36% ± 4% | |
dendritic cell | 3 studies | 31% ± 13% | |
macrophage | 3 studies | 21% ± 3% | |
astrocyte | 3 studies | 25% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2303.80 | 1445 / 1445 | 100% | 57.33 | 183 / 183 |
ovary | 100% | 3753.80 | 180 / 180 | 100% | 25.80 | 430 / 430 |
prostate | 100% | 2211.97 | 245 / 245 | 100% | 30.05 | 502 / 502 |
brain | 100% | 2101.88 | 2639 / 2642 | 100% | 38.07 | 705 / 705 |
lung | 100% | 2426.23 | 578 / 578 | 100% | 29.46 | 1152 / 1155 |
breast | 100% | 2677.42 | 459 / 459 | 100% | 34.34 | 1114 / 1118 |
thymus | 100% | 2370.36 | 653 / 653 | 99% | 22.12 | 598 / 605 |
uterus | 100% | 2817.51 | 170 / 170 | 99% | 29.86 | 453 / 459 |
kidney | 100% | 1734.43 | 89 / 89 | 98% | 24.12 | 884 / 901 |
stomach | 100% | 1695.96 | 359 / 359 | 98% | 29.94 | 280 / 286 |
bladder | 100% | 2685.10 | 21 / 21 | 97% | 22.88 | 491 / 504 |
intestine | 100% | 2437.53 | 966 / 966 | 97% | 23.01 | 513 / 527 |
pancreas | 100% | 1511.92 | 327 / 328 | 97% | 18.46 | 173 / 178 |
adrenal gland | 100% | 4958.32 | 258 / 258 | 97% | 19.72 | 222 / 230 |
skin | 100% | 3453.66 | 1809 / 1809 | 95% | 32.80 | 450 / 472 |
liver | 100% | 1139.30 | 226 / 226 | 87% | 12.22 | 353 / 406 |
adipose | 100% | 2995.95 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2783.40 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 19.13 | 29 / 29 |
spleen | 100% | 1964.83 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 33.29 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 8.55 | 1 / 1 |
muscle | 99% | 1142.51 | 797 / 803 | 0% | 0 | 0 / 0 |
heart | 96% | 1229.66 | 825 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 71% | 9.35 | 57 / 80 |
peripheral blood | 57% | 1470.62 | 525 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007165 | Biological process | signal transduction |
Gene name | LRRC58 |
Protein name | Leucine-rich repeat-containing protein 58 |
Synonyms | |
Description | |
Accessions | ENST00000295628.4 Q96CX6 |