LRRC3B report

Query

Invalid input gene. Please select from the suggestions.

I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
astrocyte	13 studies	42% ± 17%	Explore
GABAergic neuron	6 studies	32% ± 16%	Explore
glutamatergic neuron	5 studies	36% ± 9%	Explore
GABAergic interneuron	3 studies	20% ± 3%	Explore
oligodendrocyte precursor cell	3 studies	19% ± 4%	Explore
granule cell	3 studies	32% ± 12%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	7 studies	26% ± 8%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	98%	1119.05	2601 / 2642	90%	5.29	631 / 705
ovary	33%	98.73	60 / 180	30%	1.45	130 / 430
bladder	48%	353.67	10 / 21	1%	0.02	4 / 504
muscle	40%	132.07	324 / 803	0%	0	0 / 0
uterus	4%	4.99	6 / 170	9%	0.42	40 / 459
breast	7%	15.84	34 / 459	1%	0.03	13 / 1118
intestine	6%	11.71	61 / 966	0%	0.00	1 / 527
adrenal gland	0%	0.84	1 / 258	5%	0.14	11 / 230
esophagus	3%	3.72	39 / 1445	2%	0.06	4 / 183
stomach	4%	5.10	13 / 359	0%	0	0 / 286
kidney	0%	0	0 / 89	2%	0.04	16 / 901
adipose	2%	2.31	21 / 1204	0%	0	0 / 0
prostate	1%	1.63	3 / 245	0%	0	0 / 502
lung	0%	0.22	1 / 578	1%	0.04	9 / 1155
skin	0%	0.49	7 / 1809	0%	0.01	1 / 472
thymus	0%	0	0 / 653	0%	0.01	3 / 605
liver	0%	0	0 / 226	0%	0.01	2 / 406
blood vessel	0%	0.17	2 / 1335	0%	0	0 / 0
heart	0%	0.18	1 / 861	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
pancreas	0%	0	0 / 328	0%	0	0 / 178
peripheral blood	0%	0	0 / 929	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
spleen	0%	0	0 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	0%	0	0 / 45
ureter	0%	0	0 / 0	0%	0	0 / 1