I. Expression across cell types
Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| ciliated cell | 13 studies | 29% ± 10% | |
| GABAergic neuron | 3 studies | 25% ± 8% | |
| glutamatergic neuron | 3 studies | 34% ± 6% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| ciliated cell | 13 studies | 29% ± 10% | |
| GABAergic neuron | 3 studies | 25% ± 8% | |
| glutamatergic neuron | 3 studies | 34% ± 6% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 3 studies | 22% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| brain | 99% | 181.70 | 2627 / 2642 | 96% | 4.21 | 678 / 705 |
| thymus | 100% | 124.10 | 651 / 653 | 59% | 0.97 | 355 / 605 |
| kidney | 99% | 89.74 | 88 / 89 | 52% | 1.13 | 473 / 901 |
| lung | 97% | 126.95 | 562 / 578 | 52% | 1.24 | 596 / 1155 |
| ovary | 99% | 108.46 | 179 / 180 | 46% | 1.12 | 197 / 430 |
| adrenal gland | 83% | 46.41 | 214 / 258 | 62% | 1.52 | 143 / 230 |
| uterus | 97% | 111.32 | 165 / 170 | 34% | 0.83 | 155 / 459 |
| bladder | 90% | 66.95 | 19 / 21 | 36% | 0.69 | 181 / 504 |
| breast | 99% | 130.55 | 453 / 459 | 25% | 0.44 | 274 / 1118 |
| intestine | 80% | 55.69 | 773 / 966 | 33% | 0.66 | 175 / 527 |
| esophagus | 69% | 48.71 | 1001 / 1445 | 44% | 0.88 | 80 / 183 |
| prostate | 97% | 92.58 | 237 / 245 | 8% | 0.11 | 40 / 502 |
| adipose | 100% | 150.73 | 1202 / 1204 | 0% | 0 | 0 / 0 |
| spleen | 98% | 69.08 | 235 / 241 | 0% | 0 | 0 / 0 |
| blood vessel | 97% | 89.91 | 1293 / 1335 | 0% | 0 | 0 / 0 |
| skin | 57% | 60.51 | 1028 / 1809 | 39% | 0.90 | 184 / 472 |
| stomach | 56% | 41.13 | 202 / 359 | 34% | 0.71 | 97 / 286 |
| heart | 87% | 74.58 | 745 / 861 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 62% | 1.88 | 18 / 29 |
| pancreas | 14% | 5.09 | 47 / 328 | 40% | 0.66 | 71 / 178 |
| eye | 0% | 0 | 0 / 0 | 24% | 0.41 | 19 / 80 |
| tonsil | 0% | 0 | 0 / 0 | 22% | 0.47 | 10 / 45 |
| peripheral blood | 19% | 22.21 | 172 / 929 | 0% | 0 | 0 / 0 |
| muscle | 11% | 3.70 | 87 / 803 | 0% | 0 | 0 / 0 |
| liver | 4% | 1.60 | 9 / 226 | 2% | 0.03 | 7 / 406 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
| GO_0030154 | Biological process | cell differentiation |
| GO_0008150 | Biological process | biological_process |
| GO_0005575 | Cellular component | cellular_component |
| GO_0005730 | Cellular component | nucleolus |
| GO_0005737 | Cellular component | cytoplasm |
| GO_0003674 | Molecular function | molecular_function |
| Gene name | LRRC34 |
| Protein name | Leucine rich repeat containing 34 Leucine rich repeat containing 34, isoform CRA_d (cDNA FLJ37806 fis, clone BRSSN2001426, highly similar to Leucine-rich repeat-containing protein 34) Leucine-rich repeat-containing protein 34 |
| Synonyms | hCG_1787503 |
| Description | FUNCTION: Highly expressed in stem cells where it may be involved in regulation of pluripotency. In embryonic stem cells (ESCs), important for normal expression of the pluripotency regulators POU5F1/OCT4 and KLF4. Also important for expression of the ectodermal marker gene NES and the endodermal marker gene GATA4. Promotes stem cell proliferation in vitro. . |
| Accessions | ENST00000446859.7 [Q8IZ02-2] G3V115 H0YEZ4 ENST00000528597.1 Q8IZ02 ENST00000522526.6 [Q8IZ02-3] B3KT77 ENST00000522830.5 |
